Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PMS2P54278 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PMS2P54278 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.65■□□□□ 0.74
PMS2P54278 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PMS2P54278 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PMS2P54278 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PMS2P54278 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PMS2P54278 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PMS2P54278 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.65■□□□□ 0.74
PMS2P54278 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PMS2P54278 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.64■□□□□ 0.74
PMS2P54278 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PMS2P54278 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PMS2P54278 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PMS2P54278 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PMS2P54278 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
PMS2P54278 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PMS2P54278 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PMS2P54278 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PMS2P54278 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.64■□□□□ 0.73
PMS2P54278 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PMS2P54278 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.64■□□□□ 0.73
PMS2P54278 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.64■□□□□ 0.73
PMS2P54278 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.64■□□□□ 0.73
PMS2P54278 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PMS2P54278 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.64■□□□□ 0.73
PMS2P54278 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PMS2P54278 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PMS2P54278 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.64■□□□□ 0.73
PMS2P54278 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PMS2P54278 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PMS2P54278 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PMS2P54278 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.64■□□□□ 0.73
PMS2P54278 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PMS2P54278 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.64■□□□□ 0.73
PMS2P54278 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PMS2P54278 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PMS2P54278 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
PMS2P54278 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
PMS2P54278 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PMS2P54278 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PMS2P54278 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PMS2P54278 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PMS2P54278 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PMS2P54278 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.63■□□□□ 0.73
PMS2P54278 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PMS2P54278 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PMS2P54278 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.63■□□□□ 0.73
PMS2P54278 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PMS2P54278 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PMS2P54278 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.63■□□□□ 0.73
PMS2P54278 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.63■□□□□ 0.73
PMS2P54278 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.63■□□□□ 0.73
PMS2P54278 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PMS2P54278 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PMS2P54278 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PMS2P54278 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PMS2P54278 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PMS2P54278 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PMS2P54278 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PMS2P54278 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PMS2P54278 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.63■□□□□ 0.73
PMS2P54278 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PMS2P54278 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PMS2P54278 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
PMS2P54278 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PMS2P54278 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PMS2P54278 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PMS2P54278 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.62■□□□□ 0.73
PMS2P54278 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PMS2P54278 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PMS2P54278 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.62■□□□□ 0.73
PMS2P54278 KRT17P1-201ENST00000399211 1546 ntBASIC19.62■□□□□ 0.73
PMS2P54278 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PMS2P54278 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PMS2P54278 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PMS2P54278 AC010980.2-201ENST00000587099 1412 ntBASIC19.62■□□□□ 0.73
PMS2P54278 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PMS2P54278 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PMS2P54278 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PMS2P54278 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PMS2P54278 PRORSD1P-201ENST00000295112 541 ntBASIC19.62■□□□□ 0.73
PMS2P54278 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PMS2P54278 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PMS2P54278 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PMS2P54278 BX276092.2-201ENST00000417668 665 ntBASIC19.62■□□□□ 0.73
PMS2P54278 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.62■□□□□ 0.73
PMS2P54278 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PMS2P54278 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.62■□□□□ 0.73
PMS2P54278 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
PMS2P54278 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.62■□□□□ 0.73
PMS2P54278 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.62■□□□□ 0.73
PMS2P54278 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PMS2P54278 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.62■□□□□ 0.73
PMS2P54278 ANO7L1-203ENST00000602586 1720 ntBASIC19.62■□□□□ 0.73
PMS2P54278 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PMS2P54278 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PMS2P54278 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PMS2P54278 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.62■□□□□ 0.73
PMS2P54278 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms