Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.42■□□□□ 0.7
ATXN3P54252 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ATXN3P54252 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATXN3P54252 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATXN3P54252 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
ATXN3P54252 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ATXN3P54252 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATXN3P54252 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ATXN3P54252 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.41■□□□□ 0.7
ATXN3P54252 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATXN3P54252 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATXN3P54252 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATXN3P54252 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATXN3P54252 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATXN3P54252 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATXN3P54252 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ATXN3P54252 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
ATXN3P54252 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.41■□□□□ 0.7
ATXN3P54252 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.41■□□□□ 0.7
ATXN3P54252 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.41■□□□□ 0.7
ATXN3P54252 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.41■□□□□ 0.7
ATXN3P54252 SLC25A1P4-201ENST00000567977 778 ntBASIC19.41■□□□□ 0.7
ATXN3P54252 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.41■□□□□ 0.7
ATXN3P54252 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.41■□□□□ 0.7
ATXN3P54252 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
ATXN3P54252 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATXN3P54252 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.41■□□□□ 0.7
ATXN3P54252 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATXN3P54252 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATXN3P54252 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.41■□□□□ 0.7
ATXN3P54252 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATXN3P54252 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATXN3P54252 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.41■□□□□ 0.7
ATXN3P54252 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.41■□□□□ 0.7
ATXN3P54252 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
ATXN3P54252 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATXN3P54252 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ATXN3P54252 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.4■□□□□ 0.7
ATXN3P54252 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATXN3P54252 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATXN3P54252 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATXN3P54252 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ATXN3P54252 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.4■□□□□ 0.7
ATXN3P54252 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
ATXN3P54252 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.4■□□□□ 0.7
ATXN3P54252 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.4■□□□□ 0.7
ATXN3P54252 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ATXN3P54252 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATXN3P54252 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.4■□□□□ 0.7
ATXN3P54252 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
ATXN3P54252 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATXN3P54252 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ATXN3P54252 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
ATXN3P54252 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
ATXN3P54252 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.39■□□□□ 0.7
ATXN3P54252 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATXN3P54252 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ATXN3P54252 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATXN3P54252 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATXN3P54252 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.39■□□□□ 0.69
ATXN3P54252 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ATXN3P54252 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ATXN3P54252 MESTP1-201ENST00000404287 994 ntBASIC19.39■□□□□ 0.69
ATXN3P54252 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATXN3P54252 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.39■□□□□ 0.69
ATXN3P54252 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.39■□□□□ 0.69
ATXN3P54252 AC092647.4-201ENST00000457211 535 ntBASIC19.39■□□□□ 0.69
ATXN3P54252 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.39■□□□□ 0.69
ATXN3P54252 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATXN3P54252 AC063952.2-201ENST00000498792 1227 ntBASIC19.39■□□□□ 0.69
ATXN3P54252 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATXN3P54252 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.39■□□□□ 0.69
ATXN3P54252 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ATXN3P54252 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
ATXN3P54252 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ATXN3P54252 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATXN3P54252 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ATXN3P54252 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.39■□□□□ 0.69
ATXN3P54252 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATXN3P54252 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATXN3P54252 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATXN3P54252 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATXN3P54252 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.39■□□□□ 0.69
ATXN3P54252 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.39■□□□□ 0.69
ATXN3P54252 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATXN3P54252 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATXN3P54252 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATXN3P54252 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATXN3P54252 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATXN3P54252 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.38■□□□□ 0.69
ATXN3P54252 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATXN3P54252 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATXN3P54252 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATXN3P54252 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATXN3P54252 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATXN3P54252 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATXN3P54252 HMGA1P5-201ENST00000412453 271 ntBASIC19.38■□□□□ 0.69
ATXN3P54252 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATXN3P54252 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATXN3P54252 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms