Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
LBX1P52954 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
LBX1P52954 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LBX1P52954 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LBX1P52954 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LBX1P52954 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LBX1P52954 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LBX1P52954 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC21.56■■□□□ 1.04
LBX1P52954 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LBX1P52954 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
LBX1P52954 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
LBX1P52954 PTMS-202ENST00000389462 773 ntTSL 2 BASIC21.56■■□□□ 1.04
LBX1P52954 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LBX1P52954 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
LBX1P52954 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC21.56■■□□□ 1.04
LBX1P52954 AC023274.1-201ENST00000418278 595 ntBASIC21.56■■□□□ 1.04
LBX1P52954 RNA5SP415-201ENST00000517246 115 ntBASIC21.56■■□□□ 1.04
LBX1P52954 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC21.56■■□□□ 1.04
LBX1P52954 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC21.56■■□□□ 1.04
LBX1P52954 MIR3180-5-201ENST00000583743 153 ntBASIC21.56■■□□□ 1.04
LBX1P52954 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.56■■□□□ 1.04
LBX1P52954 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
LBX1P52954 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LBX1P52954 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
LBX1P52954 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.56■■□□□ 1.04
LBX1P52954 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LBX1P52954 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
LBX1P52954 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LBX1P52954 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
LBX1P52954 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
LBX1P52954 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LBX1P52954 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC21.55■■□□□ 1.04
LBX1P52954 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
LBX1P52954 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC21.55■■□□□ 1.04
LBX1P52954 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC21.55■■□□□ 1.04
LBX1P52954 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.55■■□□□ 1.04
LBX1P52954 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.55■■□□□ 1.04
LBX1P52954 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.55■■□□□ 1.04
LBX1P52954 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC21.55■■□□□ 1.04
LBX1P52954 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LBX1P52954 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LBX1P52954 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.55■■□□□ 1.04
LBX1P52954 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.55■■□□□ 1.04
LBX1P52954 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LBX1P52954 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.55■■□□□ 1.04
LBX1P52954 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LBX1P52954 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.54■■□□□ 1.04
LBX1P52954 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
LBX1P52954 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
LBX1P52954 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LBX1P52954 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
LBX1P52954 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.54■■□□□ 1.04
LBX1P52954 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC21.54■■□□□ 1.04
LBX1P52954 AC011840.4-201ENST00000578471 627 ntBASIC21.54■■□□□ 1.04
LBX1P52954 MTDHP3-201ENST00000594186 672 ntBASIC21.54■■□□□ 1.04
LBX1P52954 AP001269.4-201ENST00000609611 512 ntBASIC21.54■■□□□ 1.04
LBX1P52954 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LBX1P52954 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.54■■□□□ 1.04
LBX1P52954 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.54■■□□□ 1.04
LBX1P52954 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LBX1P52954 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LBX1P52954 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
LBX1P52954 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LBX1P52954 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
LBX1P52954 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
LBX1P52954 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
LBX1P52954 AC096582.2-201ENST00000510860 516 ntBASIC21.53■■□□□ 1.04
LBX1P52954 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC21.53■■□□□ 1.04
LBX1P52954 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC21.53■■□□□ 1.04
LBX1P52954 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LBX1P52954 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.53■■□□□ 1.04
LBX1P52954 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LBX1P52954 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.53■■□□□ 1.04
LBX1P52954 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LBX1P52954 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LBX1P52954 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
LBX1P52954 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LBX1P52954 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LBX1P52954 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LBX1P52954 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.52■■□□□ 1.04
LBX1P52954 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
LBX1P52954 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LBX1P52954 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
LBX1P52954 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LBX1P52954 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.52■■□□□ 1.04
LBX1P52954 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
LBX1P52954 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC21.52■■□□□ 1.04
LBX1P52954 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC21.52■■□□□ 1.04
LBX1P52954 THAP5-204ENST00000438865 868 ntTSL 2 BASIC21.52■■□□□ 1.04
LBX1P52954 CFL1-202ENST00000524553 860 ntTSL 2 BASIC21.52■■□□□ 1.04
LBX1P52954 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LBX1P52954 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LBX1P52954 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LBX1P52954 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
LBX1P52954 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
LBX1P52954 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.51■■□□□ 1.03
LBX1P52954 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LBX1P52954 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LBX1P52954 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LBX1P52954 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms