Protein–RNA interactions for Protein: P51957

NEK4, Serine/threonine-protein kinase Nek4, humanhuman

Predictions only

Length 841 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P51957 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC22.69■■□□□ 1.22
NEK4P51957 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC22.69■■□□□ 1.22
NEK4P51957 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NEK4P51957 AL160286.2-201ENST00000567150 934 ntBASIC22.69■■□□□ 1.22
NEK4P51957 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC22.69■■□□□ 1.22
NEK4P51957 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC22.69■■□□□ 1.22
NEK4P51957 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NEK4P51957 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
NEK4P51957 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC22.69■■□□□ 1.22
NEK4P51957 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
NEK4P51957 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC22.69■■□□□ 1.22
NEK4P51957 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
NEK4P51957 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NEK4P51957 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NEK4P51957 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NEK4P51957 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC22.68■■□□□ 1.22
NEK4P51957 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
NEK4P51957 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NEK4P51957 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC22.68■■□□□ 1.22
NEK4P51957 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NEK4P51957 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NEK4P51957 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
NEK4P51957 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NEK4P51957 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NEK4P51957 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
NEK4P51957 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NEK4P51957 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC22.68■■□□□ 1.22
NEK4P51957 GAS7-202ENST00000396115 929 ntTSL 5 BASIC22.68■■□□□ 1.22
NEK4P51957 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC22.68■■□□□ 1.22
NEK4P51957 C1QL1P1-201ENST00000568105 661 ntBASIC22.68■■□□□ 1.22
NEK4P51957 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NEK4P51957 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
NEK4P51957 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC22.68■■□□□ 1.22
NEK4P51957 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NEK4P51957 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
NEK4P51957 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NEK4P51957 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC22.68■■□□□ 1.22
NEK4P51957 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NEK4P51957 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC22.68■■□□□ 1.22
NEK4P51957 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
NEK4P51957 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NEK4P51957 AC090164.3-201ENST00000610780 2143 ntBASIC22.67■■□□□ 1.22
NEK4P51957 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC22.67■■□□□ 1.22
NEK4P51957 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC22.67■■□□□ 1.22
NEK4P51957 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
NEK4P51957 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
NEK4P51957 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC22.67■■□□□ 1.22
NEK4P51957 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
NEK4P51957 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
NEK4P51957 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
NEK4P51957 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC22.67■■□□□ 1.22
NEK4P51957 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC22.67■■□□□ 1.22
NEK4P51957 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NEK4P51957 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NEK4P51957 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
NEK4P51957 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC22.67■■□□□ 1.22
NEK4P51957 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NEK4P51957 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
NEK4P51957 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
NEK4P51957 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
NEK4P51957 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
NEK4P51957 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC22.66■■□□□ 1.22
NEK4P51957 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NEK4P51957 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC22.66■■□□□ 1.22
NEK4P51957 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
NEK4P51957 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NEK4P51957 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC22.66■■□□□ 1.22
NEK4P51957 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
NEK4P51957 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NEK4P51957 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC22.66■■□□□ 1.22
NEK4P51957 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC22.66■■□□□ 1.22
NEK4P51957 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
NEK4P51957 AP003097.1-201ENST00000530657 1135 ntBASIC22.66■■□□□ 1.22
NEK4P51957 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC22.66■■□□□ 1.22
NEK4P51957 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NEK4P51957 AC233263.1-201ENST00000578059 224 ntBASIC22.66■■□□□ 1.22
NEK4P51957 MTDHP1-201ENST00000605323 784 ntBASIC22.66■■□□□ 1.22
NEK4P51957 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC22.66■■□□□ 1.22
NEK4P51957 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
NEK4P51957 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NEK4P51957 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
NEK4P51957 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NEK4P51957 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NEK4P51957 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NEK4P51957 GAS2L1P1-201ENST00000420145 1480 ntBASIC22.66■■□□□ 1.22
NEK4P51957 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NEK4P51957 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
NEK4P51957 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC22.65■■□□□ 1.22
NEK4P51957 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NEK4P51957 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NEK4P51957 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
NEK4P51957 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NEK4P51957 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC22.65■■□□□ 1.22
NEK4P51957 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC22.65■■□□□ 1.22
NEK4P51957 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NEK4P51957 TSPY21P-201ENST00000433481 731 ntBASIC22.65■■□□□ 1.22
NEK4P51957 TSPY23P-201ENST00000440136 739 ntBASIC22.65■■□□□ 1.22
NEK4P51957 APTR-205ENST00000447009 902 ntTSL 2 BASIC22.65■■□□□ 1.22
NEK4P51957 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
NEK4P51957 RNA5SP413-201ENST00000516373 109 ntBASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms