Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDR1P51861 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CDR1P51861 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CDR1P51861 KRT8P9-201ENST00000558927 1449 ntBASIC20.81■□□□□ 0.92
CDR1P51861 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDR1P51861 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CDR1P51861 AL390955.1-201ENST00000428694 934 ntBASIC20.81■□□□□ 0.92
CDR1P51861 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.81■□□□□ 0.92
CDR1P51861 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.81■□□□□ 0.92
CDR1P51861 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.81■□□□□ 0.92
CDR1P51861 AC073195.1-201ENST00000607241 877 ntBASIC20.81■□□□□ 0.92
CDR1P51861 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDR1P51861 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDR1P51861 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CDR1P51861 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDR1P51861 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDR1P51861 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CDR1P51861 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDR1P51861 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.8■□□□□ 0.92
CDR1P51861 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.8■□□□□ 0.92
CDR1P51861 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDR1P51861 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CDR1P51861 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.8■□□□□ 0.92
CDR1P51861 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDR1P51861 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDR1P51861 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDR1P51861 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDR1P51861 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.8■□□□□ 0.92
CDR1P51861 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDR1P51861 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDR1P51861 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDR1P51861 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.8■□□□□ 0.92
CDR1P51861 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.8■□□□□ 0.92
CDR1P51861 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDR1P51861 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CDR1P51861 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDR1P51861 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDR1P51861 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.8■□□□□ 0.92
CDR1P51861 TNXA-203ENST00000507684 2038 ntBASIC20.8■□□□□ 0.92
CDR1P51861 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDR1P51861 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDR1P51861 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CDR1P51861 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDR1P51861 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDR1P51861 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.79■□□□□ 0.92
CDR1P51861 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDR1P51861 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
CDR1P51861 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.79■□□□□ 0.92
CDR1P51861 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
CDR1P51861 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDR1P51861 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CDR1P51861 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDR1P51861 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CDR1P51861 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDR1P51861 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDR1P51861 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
CDR1P51861 REXO1L10P-201ENST00000615707 1290 ntBASIC20.79■□□□□ 0.92
CDR1P51861 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.79■□□□□ 0.92
CDR1P51861 AC133561.5-201ENST00000635547 218 ntBASIC20.79■□□□□ 0.92
CDR1P51861 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDR1P51861 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.79■□□□□ 0.92
CDR1P51861 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDR1P51861 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.79■□□□□ 0.92
CDR1P51861 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
CDR1P51861 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDR1P51861 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDR1P51861 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDR1P51861 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CDR1P51861 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDR1P51861 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDR1P51861 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDR1P51861 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDR1P51861 AP000974.1-201ENST00000623909 2387 ntBASIC20.78■□□□□ 0.92
CDR1P51861 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.78■□□□□ 0.92
CDR1P51861 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.78■□□□□ 0.92
CDR1P51861 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.78■□□□□ 0.92
CDR1P51861 AC087499.1-201ENST00000418141 1075 ntBASIC20.78■□□□□ 0.92
CDR1P51861 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.78■□□□□ 0.92
CDR1P51861 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.78■□□□□ 0.92
CDR1P51861 AP000525.1-201ENST00000608286 694 ntBASIC20.78■□□□□ 0.92
CDR1P51861 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDR1P51861 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.78■□□□□ 0.92
CDR1P51861 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDR1P51861 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CDR1P51861 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDR1P51861 TMEM179-206ENST00000616017 1645 ntBASIC20.78■□□□□ 0.92
CDR1P51861 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDR1P51861 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDR1P51861 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
CDR1P51861 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDR1P51861 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDR1P51861 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDR1P51861 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDR1P51861 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDR1P51861 AC079598.2-202ENST00000546624 1451 ntBASIC20.77■□□□□ 0.92
CDR1P51861 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.77■□□□□ 0.92
CDR1P51861 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDR1P51861 NIFKP9-201ENST00000419265 221 ntBASIC20.77■□□□□ 0.92
CDR1P51861 TUBB8P6-201ENST00000436895 1288 ntBASIC20.77■□□□□ 0.92
CDR1P51861 YBX1P10-201ENST00000444752 975 ntBASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms