Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCR9P51686 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCR9P51686 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.77■□□□□ 0.27
CCR9P51686 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
CCR9P51686 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCR9P51686 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCR9P51686 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CCR9P51686 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CCR9P51686 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CCR9P51686 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.76■□□□□ 0.27
CCR9P51686 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCR9P51686 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCR9P51686 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCR9P51686 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCR9P51686 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCR9P51686 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CCR9P51686 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCR9P51686 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CCR9P51686 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.76■□□□□ 0.27
CCR9P51686 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CCR9P51686 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CCR9P51686 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
CCR9P51686 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.76■□□□□ 0.27
CCR9P51686 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.76■□□□□ 0.27
CCR9P51686 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.76■□□□□ 0.27
CCR9P51686 AL121832.2-201ENST00000610979 668 ntBASIC16.76■□□□□ 0.27
CCR9P51686 AL121829.2-201ENST00000620908 328 ntBASIC16.76■□□□□ 0.27
CCR9P51686 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCR9P51686 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.76■□□□□ 0.27
CCR9P51686 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCR9P51686 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCR9P51686 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCR9P51686 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCR9P51686 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.76■□□□□ 0.27
CCR9P51686 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.76■□□□□ 0.27
CCR9P51686 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCR9P51686 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCR9P51686 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.76■□□□□ 0.27
CCR9P51686 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCR9P51686 NOC2LP2-201ENST00000407594 1944 ntBASIC16.76■□□□□ 0.27
CCR9P51686 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CCR9P51686 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCR9P51686 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCR9P51686 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CCR9P51686 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCR9P51686 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCR9P51686 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCR9P51686 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCR9P51686 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CCR9P51686 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCR9P51686 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.75■□□□□ 0.27
CCR9P51686 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
CCR9P51686 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.75■□□□□ 0.27
CCR9P51686 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.75■□□□□ 0.27
CCR9P51686 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCR9P51686 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
CCR9P51686 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCR9P51686 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCR9P51686 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCR9P51686 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.75■□□□□ 0.27
CCR9P51686 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCR9P51686 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CCR9P51686 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCR9P51686 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCR9P51686 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.75■□□□□ 0.27
CCR9P51686 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCR9P51686 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCR9P51686 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CCR9P51686 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCR9P51686 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCR9P51686 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCR9P51686 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CCR9P51686 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.74■□□□□ 0.27
CCR9P51686 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCR9P51686 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
CCR9P51686 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCR9P51686 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCR9P51686 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.74■□□□□ 0.27
CCR9P51686 AC092368.3-202ENST00000574180 1591 ntBASIC16.74■□□□□ 0.27
CCR9P51686 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
CCR9P51686 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCR9P51686 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCR9P51686 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCR9P51686 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCR9P51686 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCR9P51686 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCR9P51686 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCR9P51686 CROCCP5-201ENST00000436658 830 ntBASIC16.74■□□□□ 0.27
CCR9P51686 AC083906.2-201ENST00000511578 360 ntBASIC16.74■□□□□ 0.27
CCR9P51686 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.74■□□□□ 0.27
CCR9P51686 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCR9P51686 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.74■□□□□ 0.27
CCR9P51686 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.74■□□□□ 0.27
CCR9P51686 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.74■□□□□ 0.27
CCR9P51686 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CCR9P51686 AC083906.6-201ENST00000641366 219 ntBASIC16.74■□□□□ 0.27
CCR9P51686 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.74■□□□□ 0.27
CCR9P51686 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.74■□□□□ 0.27
CCR9P51686 NOC2LP1-202ENST00000452600 2235 ntBASIC16.74■□□□□ 0.27
CCR9P51686 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms