Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PDE6CP51160 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PDE6CP51160 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDE6CP51160 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDE6CP51160 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDE6CP51160 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PDE6CP51160 NIFKP9-201ENST00000419265 221 ntBASIC20.57■□□□□ 0.88
PDE6CP51160 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.57■□□□□ 0.88
PDE6CP51160 FAM197Y1-201ENST00000421178 764 ntBASIC20.57■□□□□ 0.88
PDE6CP51160 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.57■□□□□ 0.88
PDE6CP51160 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.57■□□□□ 0.88
PDE6CP51160 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
PDE6CP51160 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.57■□□□□ 0.88
PDE6CP51160 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDE6CP51160 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.57■□□□□ 0.88
PDE6CP51160 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.57■□□□□ 0.88
PDE6CP51160 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PDE6CP51160 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PDE6CP51160 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDE6CP51160 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.57■□□□□ 0.88
PDE6CP51160 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.57■□□□□ 0.88
PDE6CP51160 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PDE6CP51160 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PDE6CP51160 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PDE6CP51160 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PDE6CP51160 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDE6CP51160 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDE6CP51160 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PDE6CP51160 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDE6CP51160 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDE6CP51160 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.56■□□□□ 0.88
PDE6CP51160 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDE6CP51160 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDE6CP51160 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PDE6CP51160 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.56■□□□□ 0.88
PDE6CP51160 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.56■□□□□ 0.88
PDE6CP51160 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PDE6CP51160 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDE6CP51160 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.56■□□□□ 0.88
PDE6CP51160 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PDE6CP51160 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDE6CP51160 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PDE6CP51160 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PDE6CP51160 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDE6CP51160 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.55■□□□□ 0.88
PDE6CP51160 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.55■□□□□ 0.88
PDE6CP51160 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PDE6CP51160 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDE6CP51160 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDE6CP51160 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.55■□□□□ 0.88
PDE6CP51160 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.55■□□□□ 0.88
PDE6CP51160 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.55■□□□□ 0.88
PDE6CP51160 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.55■□□□□ 0.88
PDE6CP51160 NUDT16P1-203ENST00000513809 620 ntBASIC20.55■□□□□ 0.88
PDE6CP51160 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
PDE6CP51160 AL355075.4-201ENST00000554988 638 ntBASIC20.55■□□□□ 0.88
PDE6CP51160 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.55■□□□□ 0.88
PDE6CP51160 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.55■□□□□ 0.88
PDE6CP51160 HLA-A-209ENST00000638375 975 ntBASIC20.55■□□□□ 0.88
PDE6CP51160 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.55■□□□□ 0.88
PDE6CP51160 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PDE6CP51160 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.55■□□□□ 0.88
PDE6CP51160 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDE6CP51160 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDE6CP51160 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDE6CP51160 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDE6CP51160 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.54■□□□□ 0.88
PDE6CP51160 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.54■□□□□ 0.88
PDE6CP51160 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE6CP51160 KRT16P1-201ENST00000399124 1418 ntBASIC20.54■□□□□ 0.88
PDE6CP51160 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE6CP51160 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
PDE6CP51160 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE6CP51160 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PDE6CP51160 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.54■□□□□ 0.88
PDE6CP51160 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE6CP51160 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PDE6CP51160 AC211429.1-201ENST00000415277 523 ntBASIC20.54■□□□□ 0.88
PDE6CP51160 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.54■□□□□ 0.88
PDE6CP51160 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE6CP51160 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE6CP51160 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE6CP51160 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE6CP51160 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.54■□□□□ 0.88
PDE6CP51160 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PDE6CP51160 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE6CP51160 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE6CP51160 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
PDE6CP51160 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDE6CP51160 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.54■□□□□ 0.88
PDE6CP51160 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE6CP51160 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PDE6CP51160 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE6CP51160 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE6CP51160 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE6CP51160 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDE6CP51160 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.53■□□□□ 0.88
PDE6CP51160 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE6CP51160 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE6CP51160 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms