Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF144AP50876 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF144AP50876 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF144AP50876 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF144AP50876 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF144AP50876 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RNF144AP50876 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF144AP50876 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF144AP50876 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF144AP50876 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF144AP50876 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF144AP50876 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF144AP50876 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF144AP50876 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF144AP50876 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RNF144AP50876 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RNF144AP50876 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF144AP50876 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF144AP50876 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF144AP50876 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF144AP50876 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RNF144AP50876 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RNF144AP50876 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.69■□□□□ 0.42
RNF144AP50876 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF144AP50876 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF144AP50876 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF144AP50876 AC133681.1-201ENST00000465482 601 ntBASIC17.69■□□□□ 0.42
RNF144AP50876 RPS2P4-201ENST00000476944 856 ntBASIC17.69■□□□□ 0.42
RNF144AP50876 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.69■□□□□ 0.42
RNF144AP50876 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.69■□□□□ 0.42
RNF144AP50876 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF144AP50876 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.69■□□□□ 0.42
RNF144AP50876 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF144AP50876 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF144AP50876 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RNF144AP50876 AC093503.3-201ENST00000624917 2352 ntBASIC17.69■□□□□ 0.42
RNF144AP50876 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF144AP50876 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.69■□□□□ 0.42
RNF144AP50876 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RNF144AP50876 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF144AP50876 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RNF144AP50876 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF144AP50876 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF144AP50876 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF144AP50876 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF144AP50876 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF144AP50876 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF144AP50876 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF144AP50876 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF144AP50876 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF144AP50876 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RNF144AP50876 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF144AP50876 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF144AP50876 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF144AP50876 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RNF144AP50876 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF144AP50876 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
RNF144AP50876 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.68■□□□□ 0.42
RNF144AP50876 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF144AP50876 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF144AP50876 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
RNF144AP50876 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF144AP50876 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF144AP50876 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF144AP50876 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF144AP50876 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF144AP50876 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RNF144AP50876 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF144AP50876 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF144AP50876 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF144AP50876 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF144AP50876 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
RNF144AP50876 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
RNF144AP50876 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF144AP50876 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RNF144AP50876 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF144AP50876 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF144AP50876 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
RNF144AP50876 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF144AP50876 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF144AP50876 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF144AP50876 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF144AP50876 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF144AP50876 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF144AP50876 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF144AP50876 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF144AP50876 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF144AP50876 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF144AP50876 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.67■□□□□ 0.42
RNF144AP50876 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF144AP50876 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF144AP50876 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF144AP50876 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF144AP50876 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF144AP50876 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF144AP50876 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF144AP50876 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF144AP50876 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF144AP50876 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF144AP50876 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms