Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A6P48664 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A6P48664 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A6P48664 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A6P48664 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A6P48664 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.73■□□□□ 0.59
SLC1A6P48664 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A6P48664 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
SLC1A6P48664 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SLC1A6P48664 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A6P48664 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A6P48664 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A6P48664 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SLC1A6P48664 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SLC1A6P48664 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.72■□□□□ 0.59
SLC1A6P48664 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.72■□□□□ 0.59
SLC1A6P48664 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
SLC1A6P48664 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A6P48664 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A6P48664 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A6P48664 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A6P48664 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A6P48664 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC1A6P48664 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
SLC1A6P48664 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.72■□□□□ 0.59
SLC1A6P48664 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A6P48664 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.72■□□□□ 0.59
SLC1A6P48664 AC004911.1-201ENST00000416316 871 ntBASIC18.72■□□□□ 0.59
SLC1A6P48664 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.72■□□□□ 0.59
SLC1A6P48664 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.72■□□□□ 0.59
SLC1A6P48664 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SLC1A6P48664 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC1A6P48664 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A6P48664 RAP2CP1-201ENST00000605103 478 ntBASIC18.72■□□□□ 0.59
SLC1A6P48664 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.72■□□□□ 0.59
SLC1A6P48664 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.72■□□□□ 0.59
SLC1A6P48664 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A6P48664 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC1A6P48664 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC1A6P48664 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.72■□□□□ 0.59
SLC1A6P48664 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A6P48664 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.72■□□□□ 0.59
SLC1A6P48664 ABALON-201ENST00000629058 1903 ntBASIC18.72■□□□□ 0.59
SLC1A6P48664 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SLC1A6P48664 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC1A6P48664 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SLC1A6P48664 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A6P48664 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A6P48664 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A6P48664 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC1A6P48664 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC1A6P48664 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.71■□□□□ 0.59
SLC1A6P48664 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.71■□□□□ 0.59
SLC1A6P48664 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.71■□□□□ 0.59
SLC1A6P48664 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A6P48664 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A6P48664 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A6P48664 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A6P48664 AC090340.1-201ENST00000620778 4980 ntBASIC18.71■□□□□ 0.59
SLC1A6P48664 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A6P48664 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A6P48664 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC1A6P48664 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC1A6P48664 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A6P48664 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC1A6P48664 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
SLC1A6P48664 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC1A6P48664 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A6P48664 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC1A6P48664 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
SLC1A6P48664 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
SLC1A6P48664 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
SLC1A6P48664 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC1A6P48664 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A6P48664 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.7■□□□□ 0.58
SLC1A6P48664 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SLC1A6P48664 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A6P48664 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SLC1A6P48664 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A6P48664 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A6P48664 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A6P48664 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SLC1A6P48664 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A6P48664 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SLC1A6P48664 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC1A6P48664 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.7■□□□□ 0.58
SLC1A6P48664 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A6P48664 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A6P48664 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.7■□□□□ 0.58
SLC1A6P48664 AC105036.2-201ENST00000569468 176 ntBASIC18.7■□□□□ 0.58
SLC1A6P48664 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.7■□□□□ 0.58
SLC1A6P48664 AL121906.2-201ENST00000621597 723 ntBASIC18.7■□□□□ 0.58
SLC1A6P48664 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A6P48664 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A6P48664 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A6P48664 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC1A6P48664 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A6P48664 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLC1A6P48664 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
SLC1A6P48664 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms