Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.15■□□□□ 0.66
CCNFP41002 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.15■□□□□ 0.66
CCNFP41002 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.15■□□□□ 0.66
CCNFP41002 ITM2C-210ENST00000620962 501 ntBASIC19.15■□□□□ 0.66
CCNFP41002 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCNFP41002 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.15■□□□□ 0.66
CCNFP41002 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.15■□□□□ 0.66
CCNFP41002 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCNFP41002 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCNFP41002 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CCNFP41002 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCNFP41002 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.15■□□□□ 0.66
CCNFP41002 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCNFP41002 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCNFP41002 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCNFP41002 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCNFP41002 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCNFP41002 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.14■□□□□ 0.66
CCNFP41002 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCNFP41002 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCNFP41002 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCNFP41002 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
CCNFP41002 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
CCNFP41002 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
CCNFP41002 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.14■□□□□ 0.66
CCNFP41002 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.14■□□□□ 0.66
CCNFP41002 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCNFP41002 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCNFP41002 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCNFP41002 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.14■□□□□ 0.65
CCNFP41002 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
CCNFP41002 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.14■□□□□ 0.65
CCNFP41002 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CCNFP41002 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.14■□□□□ 0.65
CCNFP41002 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.14■□□□□ 0.65
CCNFP41002 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.14■□□□□ 0.65
CCNFP41002 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCNFP41002 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCNFP41002 KRT8P8-201ENST00000434750 1448 ntBASIC19.14■□□□□ 0.65
CCNFP41002 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCNFP41002 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCNFP41002 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.14■□□□□ 0.65
CCNFP41002 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCNFP41002 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCNFP41002 AL354751.1-201ENST00000412768 1863 ntBASIC19.14■□□□□ 0.65
CCNFP41002 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
CCNFP41002 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CCNFP41002 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCNFP41002 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCNFP41002 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.13■□□□□ 0.65
CCNFP41002 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCNFP41002 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCNFP41002 KRT18P29-201ENST00000397031 1267 ntBASIC19.13■□□□□ 0.65
CCNFP41002 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.13■□□□□ 0.65
CCNFP41002 AC233263.1-201ENST00000578059 224 ntBASIC19.13■□□□□ 0.65
CCNFP41002 RN7SL471P-201ENST00000580476 299 ntBASIC19.13■□□□□ 0.65
CCNFP41002 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.13■□□□□ 0.65
CCNFP41002 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCNFP41002 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.13■□□□□ 0.65
CCNFP41002 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCNFP41002 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.13■□□□□ 0.65
CCNFP41002 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCNFP41002 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCNFP41002 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCNFP41002 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.12■□□□□ 0.65
CCNFP41002 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCNFP41002 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
CCNFP41002 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.12■□□□□ 0.65
CCNFP41002 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCNFP41002 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCNFP41002 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCNFP41002 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
CCNFP41002 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
CCNFP41002 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCNFP41002 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
CCNFP41002 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCNFP41002 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCNFP41002 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCNFP41002 AC239809.2-201ENST00000415381 517 ntBASIC19.12■□□□□ 0.65
CCNFP41002 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CCNFP41002 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.12■□□□□ 0.65
CCNFP41002 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCNFP41002 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCNFP41002 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.12■□□□□ 0.65
CCNFP41002 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCNFP41002 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CCNFP41002 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.12■□□□□ 0.65
CCNFP41002 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.12■□□□□ 0.65
CCNFP41002 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCNFP41002 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCNFP41002 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCNFP41002 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CCNFP41002 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCNFP41002 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CCNFP41002 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CCNFP41002 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCNFP41002 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCNFP41002 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCNFP41002 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCNFP41002 NBPF21P-201ENST00000425093 1451 ntBASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms