Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
HOXC8P31273 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC8P31273 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC8P31273 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.8■□□□□ 0.92
HOXC8P31273 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.8■□□□□ 0.92
HOXC8P31273 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.8■□□□□ 0.92
HOXC8P31273 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.8■□□□□ 0.92
HOXC8P31273 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.8■□□□□ 0.92
HOXC8P31273 MIR3917-201ENST00000580971 93 ntBASIC20.8■□□□□ 0.92
HOXC8P31273 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC8P31273 AC112497.1-201ENST00000624824 639 ntBASIC20.8■□□□□ 0.92
HOXC8P31273 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.8■□□□□ 0.92
HOXC8P31273 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC8P31273 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.8■□□□□ 0.92
HOXC8P31273 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC8P31273 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
HOXC8P31273 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.79■□□□□ 0.92
HOXC8P31273 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXC8P31273 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HOXC8P31273 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXC8P31273 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.79■□□□□ 0.92
HOXC8P31273 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXC8P31273 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HOXC8P31273 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXC8P31273 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
HOXC8P31273 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXC8P31273 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXC8P31273 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
HOXC8P31273 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXC8P31273 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXC8P31273 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.79■□□□□ 0.92
HOXC8P31273 MIR3180-1-201ENST00000580374 94 ntBASIC20.79■□□□□ 0.92
HOXC8P31273 MIR3180-3-201ENST00000584616 94 ntBASIC20.79■□□□□ 0.92
HOXC8P31273 AC011498.5-201ENST00000592027 486 ntBASIC20.79■□□□□ 0.92
HOXC8P31273 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXC8P31273 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.79■□□□□ 0.92
HOXC8P31273 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
HOXC8P31273 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXC8P31273 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
HOXC8P31273 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
HOXC8P31273 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC8P31273 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC8P31273 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.78■□□□□ 0.92
HOXC8P31273 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
HOXC8P31273 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.78■□□□□ 0.92
HOXC8P31273 AL512353.2-201ENST00000448759 1962 ntBASIC20.78■□□□□ 0.92
HOXC8P31273 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.78■□□□□ 0.92
HOXC8P31273 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC8P31273 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC8P31273 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.78■□□□□ 0.92
HOXC8P31273 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
HOXC8P31273 AC016734.2-201ENST00000624325 1377 ntBASIC20.78■□□□□ 0.92
HOXC8P31273 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC8P31273 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.78■□□□□ 0.92
HOXC8P31273 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.78■□□□□ 0.92
HOXC8P31273 AL157888.1-201ENST00000631930 593 ntBASIC20.78■□□□□ 0.92
HOXC8P31273 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
HOXC8P31273 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC8P31273 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.78■□□□□ 0.92
HOXC8P31273 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC8P31273 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC8P31273 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC8P31273 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
HOXC8P31273 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC8P31273 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HOXC8P31273 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXC8P31273 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXC8P31273 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXC8P31273 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXC8P31273 MIR662-201ENST00000384847 95 ntBASIC20.77■□□□□ 0.92
HOXC8P31273 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.77■□□□□ 0.92
HOXC8P31273 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
HOXC8P31273 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.77■□□□□ 0.92
HOXC8P31273 AP002383.4-201ENST00000442518 975 ntBASIC20.77■□□□□ 0.92
HOXC8P31273 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.77■□□□□ 0.92
HOXC8P31273 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.77■□□□□ 0.92
HOXC8P31273 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.77■□□□□ 0.92
HOXC8P31273 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXC8P31273 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.77■□□□□ 0.92
HOXC8P31273 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.77■□□□□ 0.92
HOXC8P31273 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HOXC8P31273 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXC8P31273 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.77■□□□□ 0.92
HOXC8P31273 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.77■□□□□ 0.92
HOXC8P31273 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXC8P31273 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HOXC8P31273 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXC8P31273 KRT8P7-201ENST00000533003 1432 ntBASIC20.77■□□□□ 0.91
HOXC8P31273 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
HOXC8P31273 HOXB1-202ENST00000577092 1414 ntBASIC20.77■□□□□ 0.91
HOXC8P31273 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
HOXC8P31273 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
HOXC8P31273 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.91
HOXC8P31273 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXC8P31273 AL162741.1-201ENST00000565563 1558 ntBASIC20.76■□□□□ 0.91
HOXC8P31273 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
HOXC8P31273 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HOXC8P31273 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXC8P31273 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.76■□□□□ 0.91
HOXC8P31273 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms