Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.51■■□□□ 1.03
CTGFP29279 TP73-AS1-207ENST00000624167 988 ntBASIC21.51■■□□□ 1.03
CTGFP29279 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CTGFP29279 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTGFP29279 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CTGFP29279 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTGFP29279 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CTGFP29279 AL512408.1-201ENST00000569378 2000 ntBASIC21.51■■□□□ 1.03
CTGFP29279 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTGFP29279 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTGFP29279 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CTGFP29279 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CTGFP29279 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.51■■□□□ 1.03
CTGFP29279 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTGFP29279 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.5■■□□□ 1.03
CTGFP29279 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CTGFP29279 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTGFP29279 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.5■■□□□ 1.03
CTGFP29279 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTGFP29279 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC21.5■■□□□ 1.03
CTGFP29279 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CTGFP29279 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.5■■□□□ 1.03
CTGFP29279 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC21.5■■□□□ 1.03
CTGFP29279 AC099336.1-202ENST00000602961 463 ntBASIC21.5■■□□□ 1.03
CTGFP29279 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
CTGFP29279 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.5■■□□□ 1.03
CTGFP29279 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.5■■□□□ 1.03
CTGFP29279 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.5■■□□□ 1.03
CTGFP29279 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.5■■□□□ 1.03
CTGFP29279 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.5■■□□□ 1.03
CTGFP29279 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTGFP29279 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.5■■□□□ 1.03
CTGFP29279 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTGFP29279 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.49■■□□□ 1.03
CTGFP29279 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CTGFP29279 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CTGFP29279 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTGFP29279 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTGFP29279 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CTGFP29279 IGHV3-47-201ENST00000425060 335 ntBASIC21.49■■□□□ 1.03
CTGFP29279 RPP21-221ENST00000428040 594 ntTSL 2 BASIC21.49■■□□□ 1.03
CTGFP29279 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTGFP29279 AF238378.1-201ENST00000526806 358 ntBASIC21.49■■□□□ 1.03
CTGFP29279 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTGFP29279 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.49■■□□□ 1.03
CTGFP29279 AL390719.2-201ENST00000606993 987 ntBASIC21.49■■□□□ 1.03
CTGFP29279 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CTGFP29279 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTGFP29279 ZNF815P-204ENST00000434898 1737 ntBASIC21.49■■□□□ 1.03
CTGFP29279 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTGFP29279 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CTGFP29279 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
CTGFP29279 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.48■■□□□ 1.03
CTGFP29279 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.48■■□□□ 1.03
CTGFP29279 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.48■■□□□ 1.03
CTGFP29279 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.48■■□□□ 1.03
CTGFP29279 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CTGFP29279 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
CTGFP29279 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC21.48■■□□□ 1.03
CTGFP29279 IL9RP2-201ENST00000423948 1312 ntBASIC21.48■■□□□ 1.03
CTGFP29279 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CTGFP29279 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.48■■□□□ 1.03
CTGFP29279 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTGFP29279 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CTGFP29279 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.47■■□□□ 1.03
CTGFP29279 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CTGFP29279 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTGFP29279 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CTGFP29279 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CTGFP29279 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTGFP29279 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CTGFP29279 KRT18P13-201ENST00000400056 1290 ntBASIC21.47■■□□□ 1.03
CTGFP29279 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC21.47■■□□□ 1.03
CTGFP29279 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.47■■□□□ 1.03
CTGFP29279 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.47■■□□□ 1.03
CTGFP29279 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CTGFP29279 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC21.47■■□□□ 1.03
CTGFP29279 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC21.47■■□□□ 1.03
CTGFP29279 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.47■■□□□ 1.03
CTGFP29279 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CTGFP29279 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.47■■□□□ 1.03
CTGFP29279 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CTGFP29279 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
CTGFP29279 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTGFP29279 AC073314.1-201ENST00000568729 2216 ntBASIC21.47■■□□□ 1.03
CTGFP29279 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTGFP29279 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTGFP29279 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTGFP29279 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTGFP29279 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTGFP29279 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CTGFP29279 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CTGFP29279 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.46■■□□□ 1.03
CTGFP29279 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.46■■□□□ 1.03
CTGFP29279 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTGFP29279 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTGFP29279 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CTGFP29279 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC21.46■■□□□ 1.03
CTGFP29279 PMS2P1-201ENST00000431037 1228 ntBASIC21.46■■□□□ 1.03
CTGFP29279 PPIE-208ENST00000470213 927 ntTSL 3 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms