Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.82■□□□□ 0.6
BCKDHBP21953 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BCKDHBP21953 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
BCKDHBP21953 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BCKDHBP21953 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
BCKDHBP21953 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.81■□□□□ 0.6
BCKDHBP21953 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.81■□□□□ 0.6
BCKDHBP21953 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.81■□□□□ 0.6
BCKDHBP21953 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BCKDHBP21953 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BCKDHBP21953 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
BCKDHBP21953 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BCKDHBP21953 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.81■□□□□ 0.6
BCKDHBP21953 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.81■□□□□ 0.6
BCKDHBP21953 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BCKDHBP21953 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.81■□□□□ 0.6
BCKDHBP21953 FAAHP1-202ENST00000446499 1238 ntBASIC18.81■□□□□ 0.6
BCKDHBP21953 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.81■□□□□ 0.6
BCKDHBP21953 AL732292.2-201ENST00000609649 430 ntBASIC18.81■□□□□ 0.6
BCKDHBP21953 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
BCKDHBP21953 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
BCKDHBP21953 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BCKDHBP21953 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
BCKDHBP21953 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.81■□□□□ 0.6
BCKDHBP21953 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.81■□□□□ 0.6
BCKDHBP21953 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BCKDHBP21953 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
BCKDHBP21953 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.81■□□□□ 0.6
BCKDHBP21953 AC093525.10-201ENST00000625130 1569 ntBASIC18.81■□□□□ 0.6
BCKDHBP21953 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BCKDHBP21953 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.81■□□□□ 0.6
BCKDHBP21953 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BCKDHBP21953 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
BCKDHBP21953 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BCKDHBP21953 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
BCKDHBP21953 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BCKDHBP21953 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
BCKDHBP21953 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
BCKDHBP21953 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.8■□□□□ 0.6
BCKDHBP21953 CHCHD2P8-201ENST00000429873 447 ntBASIC18.8■□□□□ 0.6
BCKDHBP21953 AC009078.2-202ENST00000463353 338 ntBASIC18.8■□□□□ 0.6
BCKDHBP21953 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.8■□□□□ 0.6
BCKDHBP21953 MIR3180-5-201ENST00000583743 153 ntBASIC18.8■□□□□ 0.6
BCKDHBP21953 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.8■□□□□ 0.6
BCKDHBP21953 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.8■□□□□ 0.6
BCKDHBP21953 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.8■□□□□ 0.6
BCKDHBP21953 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.8■□□□□ 0.6
BCKDHBP21953 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
BCKDHBP21953 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
BCKDHBP21953 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
BCKDHBP21953 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BCKDHBP21953 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BCKDHBP21953 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.8■□□□□ 0.6
BCKDHBP21953 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
BCKDHBP21953 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BCKDHBP21953 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BCKDHBP21953 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
BCKDHBP21953 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BCKDHBP21953 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BCKDHBP21953 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BCKDHBP21953 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
BCKDHBP21953 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.79■□□□□ 0.6
BCKDHBP21953 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BCKDHBP21953 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BCKDHBP21953 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
BCKDHBP21953 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
BCKDHBP21953 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BCKDHBP21953 HLA-F-220ENST00000434407 884 ntBASIC18.79■□□□□ 0.6
BCKDHBP21953 MCCD1P1-208ENST00000445732 328 ntBASIC18.79■□□□□ 0.6
BCKDHBP21953 NUS1P1-201ENST00000446295 882 ntBASIC18.79■□□□□ 0.6
BCKDHBP21953 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BCKDHBP21953 EMBP1-201ENST00000458200 901 ntBASIC18.79■□□□□ 0.6
BCKDHBP21953 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
BCKDHBP21953 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.79■□□□□ 0.6
BCKDHBP21953 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
BCKDHBP21953 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.79■□□□□ 0.6
BCKDHBP21953 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
BCKDHBP21953 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
BCKDHBP21953 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
BCKDHBP21953 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
BCKDHBP21953 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
BCKDHBP21953 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
BCKDHBP21953 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
BCKDHBP21953 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
BCKDHBP21953 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.79■□□□□ 0.6
BCKDHBP21953 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
BCKDHBP21953 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BCKDHBP21953 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BCKDHBP21953 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BCKDHBP21953 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BCKDHBP21953 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.78■□□□□ 0.6
BCKDHBP21953 KRT18P1-202ENST00000452408 1331 ntBASIC18.78■□□□□ 0.6
BCKDHBP21953 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BCKDHBP21953 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BCKDHBP21953 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BCKDHBP21953 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
BCKDHBP21953 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.78■□□□□ 0.6
BCKDHBP21953 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.78■□□□□ 0.6
BCKDHBP21953 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
BCKDHBP21953 AL136038.4-201ENST00000603606 1261 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms