Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.16■□□□□ 0.82
PTPN1P18031 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN1P18031 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN1P18031 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.16■□□□□ 0.82
PTPN1P18031 IRX1P1-201ENST00000438849 1838 ntBASIC20.16■□□□□ 0.82
PTPN1P18031 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN1P18031 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PTPN1P18031 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.15■□□□□ 0.82
PTPN1P18031 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.15■□□□□ 0.82
PTPN1P18031 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN1P18031 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.15■□□□□ 0.82
PTPN1P18031 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.15■□□□□ 0.82
PTPN1P18031 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.15■□□□□ 0.82
PTPN1P18031 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
PTPN1P18031 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN1P18031 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN1P18031 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN1P18031 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.15■□□□□ 0.82
PTPN1P18031 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN1P18031 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN1P18031 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN1P18031 HMGA1P5-201ENST00000412453 271 ntBASIC20.15■□□□□ 0.82
PTPN1P18031 AL137013.1-201ENST00000432946 1228 ntBASIC20.15■□□□□ 0.82
PTPN1P18031 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.15■□□□□ 0.82
PTPN1P18031 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN1P18031 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.15■□□□□ 0.82
PTPN1P18031 FAM210CP-201ENST00000445714 574 ntBASIC20.15■□□□□ 0.82
PTPN1P18031 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.15■□□□□ 0.82
PTPN1P18031 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.15■□□□□ 0.82
PTPN1P18031 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PTPN1P18031 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.15■□□□□ 0.82
PTPN1P18031 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.15■□□□□ 0.82
PTPN1P18031 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PTPN1P18031 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN1P18031 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN1P18031 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.15■□□□□ 0.82
PTPN1P18031 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN1P18031 AC005332.7-201ENST00000614046 2005 ntBASIC20.15■□□□□ 0.82
PTPN1P18031 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN1P18031 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN1P18031 AC116562.4-201ENST00000641316 2276 ntBASIC20.15■□□□□ 0.82
PTPN1P18031 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN1P18031 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.14■□□□□ 0.82
PTPN1P18031 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
PTPN1P18031 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PTPN1P18031 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN1P18031 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN1P18031 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN1P18031 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.14■□□□□ 0.81
PTPN1P18031 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PTPN1P18031 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.14■□□□□ 0.81
PTPN1P18031 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN1P18031 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.14■□□□□ 0.81
PTPN1P18031 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.14■□□□□ 0.81
PTPN1P18031 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.14■□□□□ 0.81
PTPN1P18031 TERF1P1-201ENST00000311003 1181 ntBASIC20.14■□□□□ 0.81
PTPN1P18031 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.14■□□□□ 0.81
PTPN1P18031 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.14■□□□□ 0.81
PTPN1P18031 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PTPN1P18031 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
PTPN1P18031 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.14■□□□□ 0.81
PTPN1P18031 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN1P18031 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PTPN1P18031 AC010203.1-204ENST00000548782 407 ntBASIC20.14■□□□□ 0.81
PTPN1P18031 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.14■□□□□ 0.81
PTPN1P18031 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.14■□□□□ 0.81
PTPN1P18031 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.14■□□□□ 0.81
PTPN1P18031 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
PTPN1P18031 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN1P18031 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN1P18031 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN1P18031 AC073508.3-201ENST00000619697 1419 ntBASIC20.13■□□□□ 0.81
PTPN1P18031 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.13■□□□□ 0.81
PTPN1P18031 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN1P18031 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.13■□□□□ 0.81
PTPN1P18031 AC008622.2-201ENST00000617006 1229 ntBASIC20.13■□□□□ 0.81
PTPN1P18031 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
PTPN1P18031 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN1P18031 FP475955.4-201ENST00000623131 1990 ntBASIC20.13■□□□□ 0.81
PTPN1P18031 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PTPN1P18031 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.13■□□□□ 0.81
PTPN1P18031 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN1P18031 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
PTPN1P18031 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
PTPN1P18031 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PTPN1P18031 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.12■□□□□ 0.81
PTPN1P18031 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.12■□□□□ 0.81
PTPN1P18031 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.12■□□□□ 0.81
PTPN1P18031 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.12■□□□□ 0.81
PTPN1P18031 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.12■□□□□ 0.81
PTPN1P18031 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.12■□□□□ 0.81
PTPN1P18031 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.12■□□□□ 0.81
PTPN1P18031 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PTPN1P18031 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN1P18031 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN1P18031 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN1P18031 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.12■□□□□ 0.81
PTPN1P18031 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.12■□□□□ 0.81
PTPN1P18031 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN1P18031 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms