Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC010240.3-201ENST00000607688 395 ntBASIC32.68■■■□□ 2.82
CFTRP13569 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC32.68■■■□□ 2.82
CFTRP13569 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
CFTRP13569 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC32.68■■■□□ 2.82
CFTRP13569 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
CFTRP13569 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC32.68■■■□□ 2.82
CFTRP13569 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
CFTRP13569 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC32.68■■■□□ 2.82
CFTRP13569 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC32.68■■■□□ 2.82
CFTRP13569 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC32.68■■■□□ 2.82
CFTRP13569 RPP21-221ENST00000428040 594 ntTSL 2 BASIC32.67■■■□□ 2.82
CFTRP13569 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
CFTRP13569 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC32.67■■■□□ 2.82
CFTRP13569 TEN1-204ENST00000588202 862 ntTSL 3 BASIC32.67■■■□□ 2.82
CFTRP13569 AC005332.3-201ENST00000589904 676 ntBASIC32.67■■■□□ 2.82
CFTRP13569 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC32.67■■■□□ 2.82
CFTRP13569 AL592071.1-201ENST00000611956 408 ntBASIC32.67■■■□□ 2.82
CFTRP13569 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
CFTRP13569 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
CFTRP13569 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC32.67■■■□□ 2.82
CFTRP13569 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC32.67■■■□□ 2.82
CFTRP13569 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
CFTRP13569 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC32.67■■■□□ 2.82
CFTRP13569 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC32.67■■■□□ 2.82
CFTRP13569 AC104390.1-201ENST00000555663 520 ntBASIC32.67■■■□□ 2.82
CFTRP13569 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC32.67■■■□□ 2.82
CFTRP13569 AF228730.7-201ENST00000641842 219 ntBASIC32.67■■■□□ 2.82
CFTRP13569 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
CFTRP13569 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC32.67■■■□□ 2.82
CFTRP13569 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC32.66■■■□□ 2.82
CFTRP13569 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
CFTRP13569 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
CFTRP13569 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC32.66■■■□□ 2.82
CFTRP13569 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC32.66■■■□□ 2.82
CFTRP13569 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC32.66■■■□□ 2.82
CFTRP13569 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
CFTRP13569 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
CFTRP13569 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC32.66■■■□□ 2.82
CFTRP13569 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC32.66■■■□□ 2.82
CFTRP13569 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC32.66■■■□□ 2.82
CFTRP13569 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC32.66■■■□□ 2.82
CFTRP13569 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC32.65■■■□□ 2.82
CFTRP13569 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
CFTRP13569 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
CFTRP13569 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC32.65■■■□□ 2.82
CFTRP13569 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
CFTRP13569 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
CFTRP13569 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC32.65■■■□□ 2.82
CFTRP13569 Z69720.1-201ENST00000601483 472 ntBASIC32.65■■■□□ 2.82
CFTRP13569 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC32.65■■■□□ 2.82
CFTRP13569 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
CFTRP13569 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
CFTRP13569 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC32.64■■■□□ 2.82
CFTRP13569 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC32.64■■■□□ 2.82
CFTRP13569 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC32.64■■■□□ 2.82
CFTRP13569 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
CFTRP13569 LSM5-204ENST00000409909 740 ntTSL 2 BASIC32.64■■■□□ 2.82
CFTRP13569 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC32.64■■■□□ 2.82
CFTRP13569 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
CFTRP13569 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC32.64■■■□□ 2.82
CFTRP13569 GPR32P1-201ENST00000601788 811 ntBASIC32.64■■■□□ 2.82
CFTRP13569 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
CFTRP13569 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
CFTRP13569 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
CFTRP13569 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC32.64■■■□□ 2.82
CFTRP13569 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC32.64■■■□□ 2.82
CFTRP13569 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC32.64■■■□□ 2.81
CFTRP13569 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
CFTRP13569 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC32.63■■■□□ 2.81
CFTRP13569 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC32.63■■■□□ 2.81
CFTRP13569 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC32.63■■■□□ 2.81
CFTRP13569 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
CFTRP13569 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
CFTRP13569 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC32.63■■■□□ 2.81
CFTRP13569 AP001005.1-201ENST00000571755 1248 ntBASIC32.63■■■□□ 2.81
CFTRP13569 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC32.63■■■□□ 2.81
CFTRP13569 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
CFTRP13569 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC32.63■■■□□ 2.81
CFTRP13569 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC32.63■■■□□ 2.81
CFTRP13569 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
CFTRP13569 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC32.63■■■□□ 2.81
CFTRP13569 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
CFTRP13569 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC32.62■■■□□ 2.81
CFTRP13569 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC32.62■■■□□ 2.81
CFTRP13569 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC32.62■■■□□ 2.81
CFTRP13569 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC32.62■■■□□ 2.81
CFTRP13569 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC32.62■■■□□ 2.81
CFTRP13569 RN7SL606P-201ENST00000472779 293 ntBASIC32.62■■■□□ 2.81
CFTRP13569 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC32.62■■■□□ 2.81
CFTRP13569 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC32.62■■■□□ 2.81
CFTRP13569 KRT8P7-201ENST00000533003 1432 ntBASIC32.62■■■□□ 2.81
CFTRP13569 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
CFTRP13569 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC32.62■■■□□ 2.81
CFTRP13569 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC32.62■■■□□ 2.81
CFTRP13569 CCNC-219ENST00000627680 896 ntTSL 5 BASIC32.62■■■□□ 2.81
CFTRP13569 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC32.62■■■□□ 2.81
CFTRP13569 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC32.62■■■□□ 2.81
CFTRP13569 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC32.62■■■□□ 2.81
CFTRP13569 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC32.62■■■□□ 2.81
CFTRP13569 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms