Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
COL6A2P12110 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.82■□□□□ 0.6
COL6A2P12110 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.82■□□□□ 0.6
COL6A2P12110 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL6A2P12110 C1QL1P1-201ENST00000568105 661 ntBASIC18.82■□□□□ 0.6
COL6A2P12110 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL6A2P12110 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.82■□□□□ 0.6
COL6A2P12110 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL6A2P12110 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.82■□□□□ 0.6
COL6A2P12110 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
COL6A2P12110 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL6A2P12110 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL6A2P12110 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL6A2P12110 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL6A2P12110 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
COL6A2P12110 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL6A2P12110 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL6A2P12110 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.82■□□□□ 0.6
COL6A2P12110 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL6A2P12110 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL6A2P12110 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.82■□□□□ 0.6
COL6A2P12110 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL6A2P12110 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.82■□□□□ 0.6
COL6A2P12110 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL6A2P12110 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.82■□□□□ 0.6
COL6A2P12110 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.82■□□□□ 0.6
COL6A2P12110 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
COL6A2P12110 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL6A2P12110 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.81■□□□□ 0.6
COL6A2P12110 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL6A2P12110 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
COL6A2P12110 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL6A2P12110 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL6A2P12110 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL6A2P12110 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL6A2P12110 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.81■□□□□ 0.6
COL6A2P12110 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
COL6A2P12110 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.81■□□□□ 0.6
COL6A2P12110 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
COL6A2P12110 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.81■□□□□ 0.6
COL6A2P12110 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.81■□□□□ 0.6
COL6A2P12110 AC142086.2-201ENST00000569753 217 ntBASIC18.81■□□□□ 0.6
COL6A2P12110 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.81■□□□□ 0.6
COL6A2P12110 AL109923.1-201ENST00000618799 583 ntBASIC18.81■□□□□ 0.6
COL6A2P12110 HLA-A-209ENST00000638375 975 ntBASIC18.81■□□□□ 0.6
COL6A2P12110 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL6A2P12110 NBPF21P-201ENST00000425093 1451 ntBASIC18.81■□□□□ 0.6
COL6A2P12110 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL6A2P12110 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL6A2P12110 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.81■□□□□ 0.6
COL6A2P12110 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.81■□□□□ 0.6
COL6A2P12110 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL6A2P12110 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL6A2P12110 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL6A2P12110 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.81■□□□□ 0.6
COL6A2P12110 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL6A2P12110 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL6A2P12110 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL6A2P12110 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.81■□□□□ 0.6
COL6A2P12110 BICD1-207ENST00000551848 1962 ntBASIC18.81■□□□□ 0.6
COL6A2P12110 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL6A2P12110 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.81■□□□□ 0.6
COL6A2P12110 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.81■□□□□ 0.6
COL6A2P12110 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.81■□□□□ 0.6
COL6A2P12110 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL6A2P12110 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL6A2P12110 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL6A2P12110 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.8■□□□□ 0.6
COL6A2P12110 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL6A2P12110 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL6A2P12110 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.8■□□□□ 0.6
COL6A2P12110 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
COL6A2P12110 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
COL6A2P12110 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
COL6A2P12110 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.8■□□□□ 0.6
COL6A2P12110 TSPY23P-201ENST00000440136 739 ntBASIC18.8■□□□□ 0.6
COL6A2P12110 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.8■□□□□ 0.6
COL6A2P12110 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.8■□□□□ 0.6
COL6A2P12110 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.8■□□□□ 0.6
COL6A2P12110 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.8■□□□□ 0.6
COL6A2P12110 AC004264.1-201ENST00000608354 794 ntBASIC18.8■□□□□ 0.6
COL6A2P12110 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.8■□□□□ 0.6
COL6A2P12110 AL390961.4-201ENST00000623958 2535 ntBASIC18.8■□□□□ 0.6
COL6A2P12110 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL6A2P12110 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL6A2P12110 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL6A2P12110 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
COL6A2P12110 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL6A2P12110 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL6A2P12110 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL6A2P12110 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.79■□□□□ 0.6
COL6A2P12110 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL6A2P12110 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL6A2P12110 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
COL6A2P12110 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL6A2P12110 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL6A2P12110 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL6A2P12110 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.79■□□□□ 0.6
COL6A2P12110 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL6A2P12110 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms