Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 RN7SL471P-201ENST00000580476 299 ntBASIC18.55■□□□□ 0.56
PCNAP12004 AC124016.1-201ENST00000609552 612 ntBASIC18.55■□□□□ 0.56
PCNAP12004 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.55■□□□□ 0.56
PCNAP12004 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
PCNAP12004 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCNAP12004 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCNAP12004 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.55■□□□□ 0.56
PCNAP12004 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.55■□□□□ 0.56
PCNAP12004 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCNAP12004 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
PCNAP12004 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCNAP12004 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PCNAP12004 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PCNAP12004 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCNAP12004 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCNAP12004 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PCNAP12004 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PCNAP12004 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCNAP12004 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCNAP12004 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.54■□□□□ 0.56
PCNAP12004 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
PCNAP12004 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCNAP12004 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCNAP12004 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.54■□□□□ 0.56
PCNAP12004 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.54■□□□□ 0.56
PCNAP12004 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.54■□□□□ 0.56
PCNAP12004 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.54■□□□□ 0.56
PCNAP12004 C1QBPP2-201ENST00000528754 825 ntBASIC18.54■□□□□ 0.56
PCNAP12004 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCNAP12004 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCNAP12004 C1QL1P1-201ENST00000568105 661 ntBASIC18.54■□□□□ 0.56
PCNAP12004 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PCNAP12004 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.54■□□□□ 0.56
PCNAP12004 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCNAP12004 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCNAP12004 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCNAP12004 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCNAP12004 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCNAP12004 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCNAP12004 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCNAP12004 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCNAP12004 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCNAP12004 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
PCNAP12004 AC007613.1-201ENST00000572811 2597 ntBASIC18.53■□□□□ 0.56
PCNAP12004 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.53■□□□□ 0.56
PCNAP12004 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.53■□□□□ 0.56
PCNAP12004 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCNAP12004 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.53■□□□□ 0.56
PCNAP12004 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCNAP12004 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.53■□□□□ 0.56
PCNAP12004 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCNAP12004 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCNAP12004 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCNAP12004 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCNAP12004 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCNAP12004 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCNAP12004 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.53■□□□□ 0.56
PCNAP12004 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCNAP12004 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.53■□□□□ 0.56
PCNAP12004 TSPY20P-201ENST00000450910 630 ntBASIC18.53■□□□□ 0.56
PCNAP12004 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.53■□□□□ 0.56
PCNAP12004 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.53■□□□□ 0.56
PCNAP12004 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PCNAP12004 AC110285.5-201ENST00000611501 352 ntBASIC18.53■□□□□ 0.56
PCNAP12004 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCNAP12004 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCNAP12004 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCNAP12004 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PCNAP12004 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCNAP12004 AC141586.3-201ENST00000562166 1838 ntBASIC18.53■□□□□ 0.56
PCNAP12004 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCNAP12004 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.53■□□□□ 0.56
PCNAP12004 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.53■□□□□ 0.56
PCNAP12004 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PCNAP12004 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCNAP12004 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCNAP12004 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCNAP12004 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCNAP12004 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PCNAP12004 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCNAP12004 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCNAP12004 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
PCNAP12004 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PCNAP12004 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PCNAP12004 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCNAP12004 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.52■□□□□ 0.56
PCNAP12004 KRT16P5-201ENST00000455284 522 ntBASIC18.52■□□□□ 0.56
PCNAP12004 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.52■□□□□ 0.56
PCNAP12004 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.52■□□□□ 0.56
PCNAP12004 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCNAP12004 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
PCNAP12004 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCNAP12004 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.52■□□□□ 0.56
PCNAP12004 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCNAP12004 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.52■□□□□ 0.56
PCNAP12004 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PCNAP12004 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.52■□□□□ 0.55
PCNAP12004 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PCNAP12004 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
PCNAP12004 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms