Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCL1P09341 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CXCL1P09341 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CXCL1P09341 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCL1P09341 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.78□□□□□ -0.04
CXCL1P09341 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.78□□□□□ -0.04
CXCL1P09341 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC14.78□□□□□ -0.04
CXCL1P09341 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCL1P09341 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.78□□□□□ -0.04
CXCL1P09341 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CXCL1P09341 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.77□□□□□ -0.04
CXCL1P09341 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CXCL1P09341 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.77□□□□□ -0.04
CXCL1P09341 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CXCL1P09341 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CXCL1P09341 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CXCL1P09341 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CXCL1P09341 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CXCL1P09341 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CXCL1P09341 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CXCL1P09341 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC14.77□□□□□ -0.04
CXCL1P09341 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CXCL1P09341 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CXCL1P09341 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CXCL1P09341 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CXCL1P09341 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CXCL1P09341 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CXCL1P09341 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CXCL1P09341 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CXCL1P09341 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CXCL1P09341 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CXCL1P09341 NAA20-201ENST00000310450 920 ntTSL 2 BASIC14.77□□□□□ -0.05
CXCL1P09341 NT5C3AP1-201ENST00000394500 1012 ntBASIC14.77□□□□□ -0.05
CXCL1P09341 MTURN-203ENST00000409688 843 ntTSL 2 BASIC14.77□□□□□ -0.05
CXCL1P09341 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CXCL1P09341 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
CXCL1P09341 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC14.77□□□□□ -0.05
CXCL1P09341 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC14.77□□□□□ -0.05
CXCL1P09341 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CXCL1P09341 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC14.77□□□□□ -0.05
CXCL1P09341 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CXCL1P09341 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC14.77□□□□□ -0.05
CXCL1P09341 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CXCL1P09341 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC14.77□□□□□ -0.05
CXCL1P09341 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CXCL1P09341 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.05
CXCL1P09341 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.77□□□□□ -0.05
CXCL1P09341 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC14.77□□□□□ -0.05
CXCL1P09341 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CXCL1P09341 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CXCL1P09341 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CXCL1P09341 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CXCL1P09341 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CXCL1P09341 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CXCL1P09341 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CXCL1P09341 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CXCL1P09341 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CXCL1P09341 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CXCL1P09341 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CXCL1P09341 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CXCL1P09341 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CXCL1P09341 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CXCL1P09341 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CXCL1P09341 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.76□□□□□ -0.05
CXCL1P09341 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC14.76□□□□□ -0.05
CXCL1P09341 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CXCL1P09341 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
CXCL1P09341 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CXCL1P09341 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC14.76□□□□□ -0.05
CXCL1P09341 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CXCL1P09341 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CXCL1P09341 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CXCL1P09341 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC14.76□□□□□ -0.05
CXCL1P09341 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CXCL1P09341 KRT18P20-201ENST00000548986 1279 ntBASIC14.76□□□□□ -0.05
CXCL1P09341 DUX4L2-201ENST00000561772 1275 ntBASIC14.76□□□□□ -0.05
CXCL1P09341 CCDC92B-201ENST00000575506 885 ntBASIC14.76□□□□□ -0.05
CXCL1P09341 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CXCL1P09341 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC14.76□□□□□ -0.05
CXCL1P09341 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC14.76□□□□□ -0.05
CXCL1P09341 DUX4L6-201ENST00000626483 1275 ntBASIC14.76□□□□□ -0.05
CXCL1P09341 DUX4L1-201ENST00000627662 1275 ntBASIC14.76□□□□□ -0.05
CXCL1P09341 DUX4L8-201ENST00000629013 1275 ntBASIC14.76□□□□□ -0.05
CXCL1P09341 DUX4L3-201ENST00000630187 1275 ntBASIC14.76□□□□□ -0.05
CXCL1P09341 DUX4L7-201ENST00000630678 1275 ntBASIC14.76□□□□□ -0.05
CXCL1P09341 DUX4L5-201ENST00000630834 1275 ntBASIC14.76□□□□□ -0.05
CXCL1P09341 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CXCL1P09341 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CXCL1P09341 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC14.76□□□□□ -0.05
CXCL1P09341 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CXCL1P09341 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.76□□□□□ -0.05
CXCL1P09341 AL118508.1-201ENST00000613502 2345 ntBASIC14.76□□□□□ -0.05
CXCL1P09341 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CXCL1P09341 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CXCL1P09341 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CXCL1P09341 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CXCL1P09341 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CXCL1P09341 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CXCL1P09341 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC14.76□□□□□ -0.05
CXCL1P09341 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms