Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RHOP08100 AC012313.10-201ENST00000623509 926 ntBASIC19.72■□□□□ 0.75
RHOP08100 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.72■□□□□ 0.75
RHOP08100 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.72■□□□□ 0.75
RHOP08100 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
RHOP08100 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.72■□□□□ 0.75
RHOP08100 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.72■□□□□ 0.75
RHOP08100 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RHOP08100 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.71■□□□□ 0.75
RHOP08100 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
RHOP08100 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
RHOP08100 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RHOP08100 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.71■□□□□ 0.75
RHOP08100 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RHOP08100 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RHOP08100 KRT8P3-201ENST00000519669 1449 ntBASIC19.71■□□□□ 0.75
RHOP08100 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.71■□□□□ 0.75
RHOP08100 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RHOP08100 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RHOP08100 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
RHOP08100 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RHOP08100 TPM4P1-201ENST00000436100 807 ntBASIC19.71■□□□□ 0.75
RHOP08100 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.71■□□□□ 0.75
RHOP08100 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RHOP08100 NPAP1P7-201ENST00000613027 823 ntBASIC19.71■□□□□ 0.75
RHOP08100 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.71■□□□□ 0.75
RHOP08100 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.71■□□□□ 0.75
RHOP08100 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RHOP08100 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.71■□□□□ 0.75
RHOP08100 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RHOP08100 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RHOP08100 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RHOP08100 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RHOP08100 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RHOP08100 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RHOP08100 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RHOP08100 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
RHOP08100 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RHOP08100 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RHOP08100 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RHOP08100 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RHOP08100 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.7■□□□□ 0.74
RHOP08100 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RHOP08100 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RHOP08100 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.7■□□□□ 0.74
RHOP08100 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RHOP08100 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RHOP08100 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.7■□□□□ 0.74
RHOP08100 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RHOP08100 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RHOP08100 AC092119.3-201ENST00000612618 583 ntBASIC19.7■□□□□ 0.74
RHOP08100 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RHOP08100 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.7■□□□□ 0.74
RHOP08100 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RHOP08100 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RHOP08100 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RHOP08100 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.7■□□□□ 0.74
RHOP08100 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.7■□□□□ 0.74
RHOP08100 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.7■□□□□ 0.74
RHOP08100 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RHOP08100 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RHOP08100 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RHOP08100 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.7■□□□□ 0.74
RHOP08100 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RHOP08100 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RHOP08100 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
RHOP08100 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RHOP08100 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RHOP08100 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RHOP08100 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RHOP08100 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RHOP08100 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RHOP08100 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.69■□□□□ 0.74
RHOP08100 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RHOP08100 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RHOP08100 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.69■□□□□ 0.74
RHOP08100 SEC1P-202ENST00000473944 940 ntBASIC19.69■□□□□ 0.74
RHOP08100 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.69■□□□□ 0.74
RHOP08100 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RHOP08100 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RHOP08100 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RHOP08100 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
RHOP08100 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RHOP08100 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RHOP08100 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RHOP08100 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RHOP08100 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.68■□□□□ 0.74
RHOP08100 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RHOP08100 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.68■□□□□ 0.74
RHOP08100 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RHOP08100 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RHOP08100 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RHOP08100 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RHOP08100 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RHOP08100 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
RHOP08100 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.68■□□□□ 0.74
RHOP08100 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.68■□□□□ 0.74
RHOP08100 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
RHOP08100 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.68■□□□□ 0.74
RHOP08100 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms