Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 TNXA-203ENST00000507684 2038 ntBASIC16.66■□□□□ 0.26
LCATP04180 RPPH1-201ENST00000516869 333 ntBASIC16.66■□□□□ 0.26
LCATP04180 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.66■□□□□ 0.26
LCATP04180 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LCATP04180 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.66■□□□□ 0.26
LCATP04180 FAM197Y4-202ENST00000622692 608 ntBASIC16.66■□□□□ 0.26
LCATP04180 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
LCATP04180 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LCATP04180 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.66■□□□□ 0.26
LCATP04180 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
LCATP04180 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LCATP04180 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.66■□□□□ 0.26
LCATP04180 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LCATP04180 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LCATP04180 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.66■□□□□ 0.26
LCATP04180 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LCATP04180 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.65■□□□□ 0.26
LCATP04180 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LCATP04180 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LCATP04180 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LCATP04180 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LCATP04180 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LCATP04180 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LCATP04180 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LCATP04180 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LCATP04180 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LCATP04180 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
LCATP04180 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.65■□□□□ 0.26
LCATP04180 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LCATP04180 AL049812.1-201ENST00000432563 2267 ntBASIC16.65■□□□□ 0.26
LCATP04180 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LCATP04180 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LCATP04180 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LCATP04180 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LCATP04180 AP002982.1-201ENST00000492365 877 ntBASIC16.65■□□□□ 0.26
LCATP04180 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.65■□□□□ 0.26
LCATP04180 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.65■□□□□ 0.26
LCATP04180 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.65■□□□□ 0.26
LCATP04180 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.65■□□□□ 0.26
LCATP04180 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LCATP04180 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LCATP04180 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LCATP04180 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LCATP04180 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LCATP04180 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LCATP04180 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LCATP04180 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LCATP04180 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LCATP04180 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LCATP04180 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LCATP04180 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
LCATP04180 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.64■□□□□ 0.25
LCATP04180 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
LCATP04180 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LCATP04180 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LCATP04180 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.64■□□□□ 0.25
LCATP04180 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LCATP04180 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LCATP04180 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
LCATP04180 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LCATP04180 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LCATP04180 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LCATP04180 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LCATP04180 HTR7P1-201ENST00000538670 1336 ntBASIC16.64■□□□□ 0.25
LCATP04180 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.64■□□□□ 0.25
LCATP04180 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LCATP04180 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.64■□□□□ 0.25
LCATP04180 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LCATP04180 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LCATP04180 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LCATP04180 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.63■□□□□ 0.25
LCATP04180 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.63■□□□□ 0.25
LCATP04180 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LCATP04180 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LCATP04180 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LCATP04180 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.63■□□□□ 0.25
LCATP04180 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LCATP04180 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.63■□□□□ 0.25
LCATP04180 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
LCATP04180 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.63■□□□□ 0.25
LCATP04180 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LCATP04180 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LCATP04180 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.63■□□□□ 0.25
LCATP04180 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LCATP04180 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LCATP04180 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.63■□□□□ 0.25
LCATP04180 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.63■□□□□ 0.25
LCATP04180 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.63■□□□□ 0.25
LCATP04180 ITM2C-210ENST00000620962 501 ntBASIC16.63■□□□□ 0.25
LCATP04180 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LCATP04180 FP475955.4-201ENST00000623131 1990 ntBASIC16.63■□□□□ 0.25
LCATP04180 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LCATP04180 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LCATP04180 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
LCATP04180 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
LCATP04180 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LCATP04180 AC004408.2-201ENST00000623613 2777 ntBASIC16.63■□□□□ 0.25
LCATP04180 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LCATP04180 IRX1P1-201ENST00000438849 1838 ntBASIC16.63■□□□□ 0.25
LCATP04180 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms