Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
APOC1P02654 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
APOC1P02654 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
APOC1P02654 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
APOC1P02654 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
APOC1P02654 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APOC1P02654 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
APOC1P02654 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APOC1P02654 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOC1P02654 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
APOC1P02654 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
APOC1P02654 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOC1P02654 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOC1P02654 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
APOC1P02654 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
APOC1P02654 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOC1P02654 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.81■□□□□ 0.28
APOC1P02654 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.81■□□□□ 0.28
APOC1P02654 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOC1P02654 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
APOC1P02654 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.81■□□□□ 0.28
APOC1P02654 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.81■□□□□ 0.28
APOC1P02654 HLA-L-209ENST00000420110 1011 ntBASIC16.81■□□□□ 0.28
APOC1P02654 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
APOC1P02654 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.81■□□□□ 0.28
APOC1P02654 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
APOC1P02654 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
APOC1P02654 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.81■□□□□ 0.28
APOC1P02654 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOC1P02654 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.81■□□□□ 0.28
APOC1P02654 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.81■□□□□ 0.28
APOC1P02654 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.81■□□□□ 0.28
APOC1P02654 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOC1P02654 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.81■□□□□ 0.28
APOC1P02654 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOC1P02654 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
APOC1P02654 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.81■□□□□ 0.28
APOC1P02654 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
APOC1P02654 AC020763.4-201ENST00000623414 4170 ntBASIC16.81■□□□□ 0.28
APOC1P02654 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOC1P02654 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
APOC1P02654 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.81■□□□□ 0.28
APOC1P02654 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.81■□□□□ 0.28
APOC1P02654 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOC1P02654 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOC1P02654 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
APOC1P02654 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOC1P02654 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
APOC1P02654 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOC1P02654 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOC1P02654 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOC1P02654 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOC1P02654 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
APOC1P02654 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
APOC1P02654 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.8■□□□□ 0.28
APOC1P02654 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
APOC1P02654 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOC1P02654 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOC1P02654 NBPF21P-201ENST00000425093 1451 ntBASIC16.8■□□□□ 0.28
APOC1P02654 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.8■□□□□ 0.28
APOC1P02654 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
APOC1P02654 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
APOC1P02654 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOC1P02654 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOC1P02654 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
APOC1P02654 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOC1P02654 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOC1P02654 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
APOC1P02654 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOC1P02654 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOC1P02654 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOC1P02654 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
APOC1P02654 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOC1P02654 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
APOC1P02654 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOC1P02654 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.8■□□□□ 0.28
APOC1P02654 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
APOC1P02654 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.8■□□□□ 0.28
APOC1P02654 AP003097.1-201ENST00000530657 1135 ntBASIC16.8■□□□□ 0.28
APOC1P02654 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
APOC1P02654 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.8■□□□□ 0.28
APOC1P02654 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.8■□□□□ 0.28
APOC1P02654 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.8■□□□□ 0.28
APOC1P02654 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOC1P02654 TEX21P-204ENST00000641479 1693 ntBASIC16.8■□□□□ 0.28
APOC1P02654 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.8■□□□□ 0.28
APOC1P02654 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOC1P02654 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.8■□□□□ 0.28
APOC1P02654 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
APOC1P02654 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
APOC1P02654 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.8■□□□□ 0.28
APOC1P02654 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOC1P02654 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOC1P02654 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
APOC1P02654 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.8■□□□□ 0.28
APOC1P02654 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOC1P02654 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
APOC1P02654 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
APOC1P02654 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOC1P02654 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms