Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-CO1P00395 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MT-CO1P00395 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MT-CO1P00395 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-CO1P00395 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MT-CO1P00395 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-CO1P00395 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-CO1P00395 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-CO1P00395 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
MT-CO1P00395 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-CO1P00395 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.5■□□□□ 0.71
MT-CO1P00395 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-CO1P00395 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.5■□□□□ 0.71
MT-CO1P00395 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.5■□□□□ 0.71
MT-CO1P00395 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-CO1P00395 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
MT-CO1P00395 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.5■□□□□ 0.71
MT-CO1P00395 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.5■□□□□ 0.71
MT-CO1P00395 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
MT-CO1P00395 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.5■□□□□ 0.71
MT-CO1P00395 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-CO1P00395 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-CO1P00395 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.5■□□□□ 0.71
MT-CO1P00395 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-CO1P00395 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.5■□□□□ 0.71
MT-CO1P00395 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-CO1P00395 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
MT-CO1P00395 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
MT-CO1P00395 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.49■□□□□ 0.71
MT-CO1P00395 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
MT-CO1P00395 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
MT-CO1P00395 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.49■□□□□ 0.71
MT-CO1P00395 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.49■□□□□ 0.71
MT-CO1P00395 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.49■□□□□ 0.71
MT-CO1P00395 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.49■□□□□ 0.71
MT-CO1P00395 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
MT-CO1P00395 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
MT-CO1P00395 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.49■□□□□ 0.71
MT-CO1P00395 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.49■□□□□ 0.71
MT-CO1P00395 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.49■□□□□ 0.71
MT-CO1P00395 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.49■□□□□ 0.71
MT-CO1P00395 CKBP1-201ENST00000565489 1086 ntBASIC19.49■□□□□ 0.71
MT-CO1P00395 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.49■□□□□ 0.71
MT-CO1P00395 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
MT-CO1P00395 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MT-CO1P00395 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
MT-CO1P00395 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
MT-CO1P00395 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.49■□□□□ 0.71
MT-CO1P00395 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
MT-CO1P00395 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
MT-CO1P00395 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MT-CO1P00395 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.48■□□□□ 0.71
MT-CO1P00395 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
MT-CO1P00395 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.48■□□□□ 0.71
MT-CO1P00395 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MT-CO1P00395 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MT-CO1P00395 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
MT-CO1P00395 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
MT-CO1P00395 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MT-CO1P00395 TSPY14P-201ENST00000303979 915 ntBASIC19.48■□□□□ 0.71
MT-CO1P00395 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.48■□□□□ 0.71
MT-CO1P00395 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MT-CO1P00395 C2orf69P3-201ENST00000565542 1120 ntBASIC19.48■□□□□ 0.71
MT-CO1P00395 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.48■□□□□ 0.71
MT-CO1P00395 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.48■□□□□ 0.71
MT-CO1P00395 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.48■□□□□ 0.71
MT-CO1P00395 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.48■□□□□ 0.71
MT-CO1P00395 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MT-CO1P00395 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
MT-CO1P00395 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MT-CO1P00395 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
MT-CO1P00395 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
MT-CO1P00395 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
MT-CO1P00395 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MT-CO1P00395 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MT-CO1P00395 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MT-CO1P00395 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MT-CO1P00395 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
MT-CO1P00395 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.47■□□□□ 0.71
MT-CO1P00395 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.47■□□□□ 0.71
MT-CO1P00395 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.47■□□□□ 0.71
MT-CO1P00395 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.47■□□□□ 0.71
MT-CO1P00395 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MT-CO1P00395 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.47■□□□□ 0.71
MT-CO1P00395 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MT-CO1P00395 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MT-CO1P00395 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.47■□□□□ 0.71
MT-CO1P00395 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.47■□□□□ 0.71
MT-CO1P00395 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.47■□□□□ 0.71
MT-CO1P00395 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
MT-CO1P00395 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.46■□□□□ 0.71
MT-CO1P00395 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MT-CO1P00395 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.46■□□□□ 0.71
MT-CO1P00395 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MT-CO1P00395 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MT-CO1P00395 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MT-CO1P00395 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
MT-CO1P00395 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
MT-CO1P00395 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MT-CO1P00395 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms