Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNOT4O95628 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNOT4O95628 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNOT4O95628 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNOT4O95628 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CNOT4O95628 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CNOT4O95628 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNOT4O95628 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNOT4O95628 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNOT4O95628 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNOT4O95628 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.91■□□□□ 0.3
CNOT4O95628 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
CNOT4O95628 AC008040.2-201ENST00000461049 708 ntBASIC16.91■□□□□ 0.3
CNOT4O95628 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.91■□□□□ 0.3
CNOT4O95628 SLC25A1P4-201ENST00000567977 778 ntBASIC16.91■□□□□ 0.3
CNOT4O95628 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.91■□□□□ 0.3
CNOT4O95628 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.91■□□□□ 0.3
CNOT4O95628 AC145285.6-201ENST00000604632 637 ntBASIC16.91■□□□□ 0.3
CNOT4O95628 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.91■□□□□ 0.3
CNOT4O95628 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CNOT4O95628 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.91■□□□□ 0.3
CNOT4O95628 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CNOT4O95628 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNOT4O95628 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.91■□□□□ 0.3
CNOT4O95628 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNOT4O95628 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.91■□□□□ 0.3
CNOT4O95628 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.91■□□□□ 0.3
CNOT4O95628 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNOT4O95628 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CNOT4O95628 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.91■□□□□ 0.3
CNOT4O95628 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.91■□□□□ 0.3
CNOT4O95628 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNOT4O95628 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.9■□□□□ 0.3
CNOT4O95628 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CNOT4O95628 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNOT4O95628 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CNOT4O95628 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNOT4O95628 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
CNOT4O95628 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.9■□□□□ 0.3
CNOT4O95628 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
CNOT4O95628 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CNOT4O95628 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNOT4O95628 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CNOT4O95628 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.9■□□□□ 0.3
CNOT4O95628 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.9■□□□□ 0.3
CNOT4O95628 SLC25A1P2-201ENST00000430693 912 ntBASIC16.9■□□□□ 0.3
CNOT4O95628 MFAP1P1-201ENST00000442257 1255 ntBASIC16.9■□□□□ 0.3
CNOT4O95628 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.9■□□□□ 0.3
CNOT4O95628 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CNOT4O95628 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CNOT4O95628 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNOT4O95628 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.9■□□□□ 0.3
CNOT4O95628 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNOT4O95628 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNOT4O95628 AFG3L1P-217ENST00000557444 2447 ntBASIC16.9■□□□□ 0.3
CNOT4O95628 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNOT4O95628 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.9■□□□□ 0.3
CNOT4O95628 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
CNOT4O95628 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNOT4O95628 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.9■□□□□ 0.3
CNOT4O95628 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CNOT4O95628 LINC01465-201ENST00000408887 1940 ntBASIC16.9■□□□□ 0.3
CNOT4O95628 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.9■□□□□ 0.3
CNOT4O95628 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.9■□□□□ 0.3
CNOT4O95628 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CNOT4O95628 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.89■□□□□ 0.3
CNOT4O95628 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CNOT4O95628 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT4O95628 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT4O95628 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT4O95628 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
CNOT4O95628 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.89■□□□□ 0.29
CNOT4O95628 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.89■□□□□ 0.29
CNOT4O95628 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.89■□□□□ 0.29
CNOT4O95628 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT4O95628 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT4O95628 TSPY14P-201ENST00000303979 915 ntBASIC16.89■□□□□ 0.29
CNOT4O95628 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
CNOT4O95628 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CNOT4O95628 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
CNOT4O95628 CRYGFP-201ENST00000418459 633 ntBASIC16.89■□□□□ 0.29
CNOT4O95628 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CNOT4O95628 EGLN1P1-201ENST00000531623 762 ntBASIC16.89■□□□□ 0.29
CNOT4O95628 CKBP1-201ENST00000565489 1086 ntBASIC16.89■□□□□ 0.29
CNOT4O95628 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT4O95628 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT4O95628 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CNOT4O95628 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT4O95628 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT4O95628 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT4O95628 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT4O95628 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.89■□□□□ 0.29
CNOT4O95628 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNOT4O95628 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
CNOT4O95628 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CNOT4O95628 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CNOT4O95628 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.88■□□□□ 0.29
CNOT4O95628 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT4O95628 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNOT4O95628 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms