Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.14■□□□□ 0.65
VAPBO95292 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.14■□□□□ 0.65
VAPBO95292 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VAPBO95292 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.14■□□□□ 0.65
VAPBO95292 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.14■□□□□ 0.65
VAPBO95292 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VAPBO95292 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VAPBO95292 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VAPBO95292 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VAPBO95292 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VAPBO95292 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VAPBO95292 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VAPBO95292 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.14■□□□□ 0.65
VAPBO95292 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.13■□□□□ 0.65
VAPBO95292 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
VAPBO95292 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
VAPBO95292 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VAPBO95292 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VAPBO95292 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
VAPBO95292 C1QBPP2-201ENST00000528754 825 ntBASIC19.13■□□□□ 0.65
VAPBO95292 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VAPBO95292 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.13■□□□□ 0.65
VAPBO95292 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.13■□□□□ 0.65
VAPBO95292 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.13■□□□□ 0.65
VAPBO95292 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.13■□□□□ 0.65
VAPBO95292 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VAPBO95292 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.13■□□□□ 0.65
VAPBO95292 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VAPBO95292 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
VAPBO95292 NEFHP1-201ENST00000412845 2629 ntBASIC19.12■□□□□ 0.65
VAPBO95292 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
VAPBO95292 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VAPBO95292 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VAPBO95292 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VAPBO95292 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
VAPBO95292 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VAPBO95292 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.12■□□□□ 0.65
VAPBO95292 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VAPBO95292 KRT8P41-201ENST00000533985 1514 ntBASIC19.12■□□□□ 0.65
VAPBO95292 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VAPBO95292 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VAPBO95292 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VAPBO95292 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.12■□□□□ 0.65
VAPBO95292 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.12■□□□□ 0.65
VAPBO95292 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
VAPBO95292 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
VAPBO95292 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.12■□□□□ 0.65
VAPBO95292 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.12■□□□□ 0.65
VAPBO95292 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
VAPBO95292 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
VAPBO95292 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
VAPBO95292 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.11■□□□□ 0.65
VAPBO95292 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
VAPBO95292 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VAPBO95292 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VAPBO95292 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
VAPBO95292 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
VAPBO95292 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
VAPBO95292 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VAPBO95292 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VAPBO95292 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VAPBO95292 TSPY23P-201ENST00000440136 739 ntBASIC19.11■□□□□ 0.65
VAPBO95292 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
VAPBO95292 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VAPBO95292 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.11■□□□□ 0.65
VAPBO95292 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.11■□□□□ 0.65
VAPBO95292 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.11■□□□□ 0.65
VAPBO95292 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
VAPBO95292 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
VAPBO95292 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
VAPBO95292 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.11■□□□□ 0.65
VAPBO95292 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
VAPBO95292 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VAPBO95292 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
VAPBO95292 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.11■□□□□ 0.65
VAPBO95292 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VAPBO95292 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
VAPBO95292 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.1■□□□□ 0.65
VAPBO95292 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.1■□□□□ 0.65
VAPBO95292 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VAPBO95292 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VAPBO95292 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VAPBO95292 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VAPBO95292 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VAPBO95292 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VAPBO95292 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.1■□□□□ 0.65
VAPBO95292 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.1■□□□□ 0.65
VAPBO95292 AL138781.2-201ENST00000617896 1843 ntBASIC19.1■□□□□ 0.65
VAPBO95292 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VAPBO95292 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.1■□□□□ 0.65
VAPBO95292 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
VAPBO95292 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
VAPBO95292 Z85996.1-201ENST00000494644 937 ntBASIC19.1■□□□□ 0.65
VAPBO95292 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.1■□□□□ 0.65
VAPBO95292 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.1■□□□□ 0.65
VAPBO95292 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VAPBO95292 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
VAPBO95292 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.1■□□□□ 0.65
VAPBO95292 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VAPBO95292 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms