Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AC010653.2-201ENST00000623505 997 ntBASIC20■□□□□ 0.79
BEST1O76090 FP475955.4-201ENST00000623131 1990 ntBASIC20■□□□□ 0.79
BEST1O76090 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BEST1O76090 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
BEST1O76090 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
BEST1O76090 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20■□□□□ 0.79
BEST1O76090 AL161938.1-201ENST00000569833 2180 ntBASIC20■□□□□ 0.79
BEST1O76090 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BEST1O76090 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.99■□□□□ 0.79
BEST1O76090 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
BEST1O76090 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BEST1O76090 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BEST1O76090 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
BEST1O76090 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BEST1O76090 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.99■□□□□ 0.79
BEST1O76090 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.99■□□□□ 0.79
BEST1O76090 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
BEST1O76090 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BEST1O76090 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BEST1O76090 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
BEST1O76090 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
BEST1O76090 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
BEST1O76090 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.99■□□□□ 0.79
BEST1O76090 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
BEST1O76090 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BEST1O76090 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.99■□□□□ 0.79
BEST1O76090 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BEST1O76090 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BEST1O76090 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BEST1O76090 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.99■□□□□ 0.79
BEST1O76090 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.99■□□□□ 0.79
BEST1O76090 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BEST1O76090 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BEST1O76090 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
BEST1O76090 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.99■□□□□ 0.79
BEST1O76090 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
BEST1O76090 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BEST1O76090 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
BEST1O76090 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.98■□□□□ 0.79
BEST1O76090 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BEST1O76090 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
BEST1O76090 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BEST1O76090 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
BEST1O76090 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BEST1O76090 AL137013.1-201ENST00000432946 1228 ntBASIC19.98■□□□□ 0.79
BEST1O76090 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.98■□□□□ 0.79
BEST1O76090 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.98■□□□□ 0.79
BEST1O76090 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.98■□□□□ 0.79
BEST1O76090 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.98■□□□□ 0.79
BEST1O76090 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
BEST1O76090 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BEST1O76090 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BEST1O76090 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
BEST1O76090 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BEST1O76090 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
BEST1O76090 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
BEST1O76090 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BEST1O76090 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BEST1O76090 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.97■□□□□ 0.79
BEST1O76090 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
BEST1O76090 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
BEST1O76090 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.97■□□□□ 0.79
BEST1O76090 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BEST1O76090 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.97■□□□□ 0.79
BEST1O76090 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
BEST1O76090 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BEST1O76090 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
BEST1O76090 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.97■□□□□ 0.79
BEST1O76090 HMGA1P5-201ENST00000412453 271 ntBASIC19.97■□□□□ 0.79
BEST1O76090 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
BEST1O76090 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
BEST1O76090 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.97■□□□□ 0.79
BEST1O76090 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.97■□□□□ 0.79
BEST1O76090 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BEST1O76090 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BEST1O76090 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BEST1O76090 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
BEST1O76090 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.97■□□□□ 0.79
BEST1O76090 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BEST1O76090 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
BEST1O76090 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
BEST1O76090 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BEST1O76090 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
BEST1O76090 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.96■□□□□ 0.79
BEST1O76090 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
BEST1O76090 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
BEST1O76090 KRT8P3-201ENST00000519669 1449 ntBASIC19.96■□□□□ 0.79
BEST1O76090 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BEST1O76090 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BEST1O76090 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
BEST1O76090 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BEST1O76090 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BEST1O76090 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.96■□□□□ 0.79
BEST1O76090 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
BEST1O76090 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.96■□□□□ 0.79
BEST1O76090 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
BEST1O76090 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.96■□□□□ 0.79
BEST1O76090 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.96■□□□□ 0.79
BEST1O76090 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.96■□□□□ 0.79
BEST1O76090 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms