Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRCH4O75427 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
LRCH4O75427 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.83■□□□□ 0.76
LRCH4O75427 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LRCH4O75427 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.83■□□□□ 0.76
LRCH4O75427 AL512353.2-201ENST00000448759 1962 ntBASIC19.83■□□□□ 0.76
LRCH4O75427 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRCH4O75427 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LRCH4O75427 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRCH4O75427 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.82■□□□□ 0.76
LRCH4O75427 RNF165-205ENST00000588679 2904 ntBASIC19.82■□□□□ 0.76
LRCH4O75427 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRCH4O75427 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRCH4O75427 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.82■□□□□ 0.76
LRCH4O75427 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRCH4O75427 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.82■□□□□ 0.76
LRCH4O75427 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.82■□□□□ 0.76
LRCH4O75427 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRCH4O75427 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRCH4O75427 AC011506.1-201ENST00000474329 610 ntBASIC19.82■□□□□ 0.76
LRCH4O75427 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.82■□□□□ 0.76
LRCH4O75427 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRCH4O75427 PRSS44-201ENST00000515154 1146 ntBASIC19.82■□□□□ 0.76
LRCH4O75427 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRCH4O75427 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.82■□□□□ 0.76
LRCH4O75427 AC011298.2-201ENST00000617989 482 ntBASIC19.82■□□□□ 0.76
LRCH4O75427 AC083906.6-201ENST00000641366 219 ntBASIC19.82■□□□□ 0.76
LRCH4O75427 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRCH4O75427 AL135905.2-201ENST00000584934 1404 ntBASIC19.82■□□□□ 0.76
LRCH4O75427 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.82■□□□□ 0.76
LRCH4O75427 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRCH4O75427 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.81■□□□□ 0.76
LRCH4O75427 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.81■□□□□ 0.76
LRCH4O75427 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRCH4O75427 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.81■□□□□ 0.76
LRCH4O75427 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRCH4O75427 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRCH4O75427 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRCH4O75427 MESTP1-201ENST00000404287 994 ntBASIC19.81■□□□□ 0.76
LRCH4O75427 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRCH4O75427 FAM197Y1-201ENST00000421178 764 ntBASIC19.81■□□□□ 0.76
LRCH4O75427 B3GAT3P1-201ENST00000471720 806 ntBASIC19.81■□□□□ 0.76
LRCH4O75427 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.81■□□□□ 0.76
LRCH4O75427 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRCH4O75427 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
LRCH4O75427 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.81■□□□□ 0.76
LRCH4O75427 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.81■□□□□ 0.76
LRCH4O75427 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.81■□□□□ 0.76
LRCH4O75427 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRCH4O75427 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.81■□□□□ 0.76
LRCH4O75427 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRCH4O75427 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
LRCH4O75427 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRCH4O75427 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
LRCH4O75427 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRCH4O75427 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRCH4O75427 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRCH4O75427 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.81■□□□□ 0.76
LRCH4O75427 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
LRCH4O75427 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRCH4O75427 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRCH4O75427 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.8■□□□□ 0.76
LRCH4O75427 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.8■□□□□ 0.76
LRCH4O75427 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRCH4O75427 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRCH4O75427 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.8■□□□□ 0.76
LRCH4O75427 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.8■□□□□ 0.76
LRCH4O75427 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRCH4O75427 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRCH4O75427 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.8■□□□□ 0.76
LRCH4O75427 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRCH4O75427 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.8■□□□□ 0.76
LRCH4O75427 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.8■□□□□ 0.76
LRCH4O75427 CD177P1-201ENST00000606252 935 ntBASIC19.8■□□□□ 0.76
LRCH4O75427 MIR6786-201ENST00000616843 113 ntBASIC19.8■□□□□ 0.76
LRCH4O75427 AC130371.2-201ENST00000619443 611 ntBASIC19.8■□□□□ 0.76
LRCH4O75427 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.8■□□□□ 0.76
LRCH4O75427 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.8■□□□□ 0.76
LRCH4O75427 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.8■□□□□ 0.76
LRCH4O75427 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRCH4O75427 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRCH4O75427 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRCH4O75427 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRCH4O75427 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRCH4O75427 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.79■□□□□ 0.76
LRCH4O75427 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.79■□□□□ 0.76
LRCH4O75427 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRCH4O75427 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRCH4O75427 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRCH4O75427 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRCH4O75427 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
LRCH4O75427 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRCH4O75427 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.79■□□□□ 0.76
LRCH4O75427 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.79■□□□□ 0.76
LRCH4O75427 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRCH4O75427 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.79■□□□□ 0.76
LRCH4O75427 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRCH4O75427 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRCH4O75427 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRCH4O75427 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms