Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
OPHN1O60890 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
OPHN1O60890 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
OPHN1O60890 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
OPHN1O60890 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
OPHN1O60890 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.85■□□□□ 0.77
OPHN1O60890 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.85■□□□□ 0.77
OPHN1O60890 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.85■□□□□ 0.77
OPHN1O60890 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.85■□□□□ 0.77
OPHN1O60890 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
OPHN1O60890 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.85■□□□□ 0.77
OPHN1O60890 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
OPHN1O60890 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
OPHN1O60890 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
OPHN1O60890 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
OPHN1O60890 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
OPHN1O60890 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.85■□□□□ 0.77
OPHN1O60890 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
OPHN1O60890 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
OPHN1O60890 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.84■□□□□ 0.77
OPHN1O60890 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
OPHN1O60890 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
OPHN1O60890 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.84■□□□□ 0.77
OPHN1O60890 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
OPHN1O60890 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
OPHN1O60890 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
OPHN1O60890 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
OPHN1O60890 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
OPHN1O60890 FAM197Y1-201ENST00000421178 764 ntBASIC19.84■□□□□ 0.77
OPHN1O60890 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.84■□□□□ 0.77
OPHN1O60890 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.84■□□□□ 0.77
OPHN1O60890 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.84■□□□□ 0.77
OPHN1O60890 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.84■□□□□ 0.77
OPHN1O60890 KRT18P16-201ENST00000510337 1294 ntBASIC19.84■□□□□ 0.77
OPHN1O60890 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
OPHN1O60890 AC145285.6-201ENST00000604632 637 ntBASIC19.84■□□□□ 0.77
OPHN1O60890 MIR6786-201ENST00000616843 113 ntBASIC19.84■□□□□ 0.77
OPHN1O60890 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
OPHN1O60890 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.84■□□□□ 0.77
OPHN1O60890 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.84■□□□□ 0.77
OPHN1O60890 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.84■□□□□ 0.77
OPHN1O60890 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.84■□□□□ 0.77
OPHN1O60890 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
OPHN1O60890 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
OPHN1O60890 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
OPHN1O60890 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.84■□□□□ 0.77
OPHN1O60890 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
OPHN1O60890 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
OPHN1O60890 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
OPHN1O60890 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
OPHN1O60890 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
OPHN1O60890 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
OPHN1O60890 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
OPHN1O60890 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
OPHN1O60890 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
OPHN1O60890 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.83■□□□□ 0.77
OPHN1O60890 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
OPHN1O60890 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
OPHN1O60890 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
OPHN1O60890 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.83■□□□□ 0.77
OPHN1O60890 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
OPHN1O60890 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.83■□□□□ 0.77
OPHN1O60890 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.83■□□□□ 0.77
OPHN1O60890 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
OPHN1O60890 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
OPHN1O60890 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
OPHN1O60890 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
OPHN1O60890 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.83■□□□□ 0.76
OPHN1O60890 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
OPHN1O60890 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.83■□□□□ 0.76
OPHN1O60890 AP000974.1-201ENST00000623909 2387 ntBASIC19.83■□□□□ 0.76
OPHN1O60890 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
OPHN1O60890 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
OPHN1O60890 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
OPHN1O60890 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
OPHN1O60890 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
OPHN1O60890 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
OPHN1O60890 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
OPHN1O60890 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
OPHN1O60890 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
OPHN1O60890 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
OPHN1O60890 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
OPHN1O60890 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
OPHN1O60890 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.82■□□□□ 0.76
OPHN1O60890 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
OPHN1O60890 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
OPHN1O60890 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
OPHN1O60890 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.82■□□□□ 0.76
OPHN1O60890 AC098818.2-201ENST00000564925 2320 ntBASIC19.82■□□□□ 0.76
OPHN1O60890 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
OPHN1O60890 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
OPHN1O60890 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.82■□□□□ 0.76
OPHN1O60890 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.82■□□□□ 0.76
OPHN1O60890 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.81■□□□□ 0.76
OPHN1O60890 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
OPHN1O60890 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
OPHN1O60890 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.81■□□□□ 0.76
OPHN1O60890 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
OPHN1O60890 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
OPHN1O60890 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms