Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VEGFDO43915 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VEGFDO43915 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.69■□□□□ 0.58
VEGFDO43915 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.69■□□□□ 0.58
VEGFDO43915 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.69■□□□□ 0.58
VEGFDO43915 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.69■□□□□ 0.58
VEGFDO43915 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
VEGFDO43915 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
VEGFDO43915 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.69■□□□□ 0.58
VEGFDO43915 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VEGFDO43915 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VEGFDO43915 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.69■□□□□ 0.58
VEGFDO43915 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.69■□□□□ 0.58
VEGFDO43915 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.69■□□□□ 0.58
VEGFDO43915 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.69■□□□□ 0.58
VEGFDO43915 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
VEGFDO43915 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VEGFDO43915 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
VEGFDO43915 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
VEGFDO43915 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.68■□□□□ 0.58
VEGFDO43915 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VEGFDO43915 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.68■□□□□ 0.58
VEGFDO43915 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
VEGFDO43915 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VEGFDO43915 INGX-201ENST00000359239 846 ntBASIC18.68■□□□□ 0.58
VEGFDO43915 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.68■□□□□ 0.58
VEGFDO43915 HMGA1P5-201ENST00000412453 271 ntBASIC18.68■□□□□ 0.58
VEGFDO43915 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.68■□□□□ 0.58
VEGFDO43915 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.68■□□□□ 0.58
VEGFDO43915 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.68■□□□□ 0.58
VEGFDO43915 FAM87A-204ENST00000613235 858 ntBASIC18.68■□□□□ 0.58
VEGFDO43915 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VEGFDO43915 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
VEGFDO43915 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VEGFDO43915 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
VEGFDO43915 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VEGFDO43915 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
VEGFDO43915 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
VEGFDO43915 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.67■□□□□ 0.58
VEGFDO43915 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
VEGFDO43915 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VEGFDO43915 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VEGFDO43915 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
VEGFDO43915 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
VEGFDO43915 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VEGFDO43915 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.67■□□□□ 0.58
VEGFDO43915 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VEGFDO43915 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
VEGFDO43915 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.67■□□□□ 0.58
VEGFDO43915 SLC25A3P1-201ENST00000443844 931 ntBASIC18.67■□□□□ 0.58
VEGFDO43915 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VEGFDO43915 AP003041.3-201ENST00000527151 707 ntBASIC18.67■□□□□ 0.58
VEGFDO43915 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
VEGFDO43915 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.67■□□□□ 0.58
VEGFDO43915 AL512604.3-201ENST00000569583 964 ntBASIC18.67■□□□□ 0.58
VEGFDO43915 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.67■□□□□ 0.58
VEGFDO43915 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.67■□□□□ 0.58
VEGFDO43915 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.67■□□□□ 0.58
VEGFDO43915 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VEGFDO43915 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
VEGFDO43915 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VEGFDO43915 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VEGFDO43915 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
VEGFDO43915 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VEGFDO43915 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VEGFDO43915 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
VEGFDO43915 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.66■□□□□ 0.58
VEGFDO43915 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VEGFDO43915 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.66■□□□□ 0.58
VEGFDO43915 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.66■□□□□ 0.58
VEGFDO43915 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VEGFDO43915 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VEGFDO43915 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.66■□□□□ 0.58
VEGFDO43915 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VEGFDO43915 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
VEGFDO43915 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VEGFDO43915 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.66■□□□□ 0.58
VEGFDO43915 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.66■□□□□ 0.58
VEGFDO43915 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.66■□□□□ 0.58
VEGFDO43915 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.66■□□□□ 0.58
VEGFDO43915 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VEGFDO43915 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VEGFDO43915 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
VEGFDO43915 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
VEGFDO43915 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VEGFDO43915 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VEGFDO43915 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VEGFDO43915 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
VEGFDO43915 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VEGFDO43915 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.65■□□□□ 0.58
VEGFDO43915 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
VEGFDO43915 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VEGFDO43915 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VEGFDO43915 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
VEGFDO43915 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.65■□□□□ 0.58
VEGFDO43915 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.65■□□□□ 0.58
VEGFDO43915 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VEGFDO43915 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VEGFDO43915 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
VEGFDO43915 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms