Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP2O43734 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP2O43734 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP2O43734 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAF3IP2O43734 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP2O43734 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP2O43734 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP2O43734 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP2O43734 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP2O43734 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TRAF3IP2O43734 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAF3IP2O43734 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP2O43734 NUDT16P1-203ENST00000513809 620 ntBASIC16.98■□□□□ 0.31
TRAF3IP2O43734 PRSS44-201ENST00000515154 1146 ntBASIC16.98■□□□□ 0.31
TRAF3IP2O43734 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAF3IP2O43734 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAF3IP2O43734 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.98■□□□□ 0.31
TRAF3IP2O43734 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.98■□□□□ 0.31
TRAF3IP2O43734 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.98■□□□□ 0.31
TRAF3IP2O43734 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.98■□□□□ 0.31
TRAF3IP2O43734 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP2O43734 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.98■□□□□ 0.31
TRAF3IP2O43734 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP2O43734 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.98■□□□□ 0.31
TRAF3IP2O43734 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP2O43734 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP2O43734 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAF3IP2O43734 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP2O43734 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP2O43734 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP2O43734 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP2O43734 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP2O43734 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAF3IP2O43734 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
TRAF3IP2O43734 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TRAF3IP2O43734 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAF3IP2O43734 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAF3IP2O43734 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
TRAF3IP2O43734 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.97■□□□□ 0.31
TRAF3IP2O43734 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TRAF3IP2O43734 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAF3IP2O43734 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.97■□□□□ 0.31
TRAF3IP2O43734 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.97■□□□□ 0.31
TRAF3IP2O43734 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAF3IP2O43734 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.97■□□□□ 0.31
TRAF3IP2O43734 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAF3IP2O43734 AC130371.2-201ENST00000619443 611 ntBASIC16.97■□□□□ 0.31
TRAF3IP2O43734 TNXA-203ENST00000507684 2038 ntBASIC16.97■□□□□ 0.31
TRAF3IP2O43734 FSCN1P1-201ENST00000568912 1481 ntBASIC16.97■□□□□ 0.31
TRAF3IP2O43734 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TRAF3IP2O43734 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAF3IP2O43734 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAF3IP2O43734 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAF3IP2O43734 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAF3IP2O43734 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAF3IP2O43734 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRAF3IP2O43734 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
TRAF3IP2O43734 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAF3IP2O43734 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAF3IP2O43734 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAF3IP2O43734 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAF3IP2O43734 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAF3IP2O43734 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAF3IP2O43734 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAF3IP2O43734 AC116562.2-201ENST00000507042 360 ntBASIC16.96■□□□□ 0.31
TRAF3IP2O43734 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAF3IP2O43734 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.96■□□□□ 0.31
TRAF3IP2O43734 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAF3IP2O43734 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAF3IP2O43734 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAF3IP2O43734 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAF3IP2O43734 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAF3IP2O43734 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAF3IP2O43734 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAF3IP2O43734 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAF3IP2O43734 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAF3IP2O43734 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAF3IP2O43734 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAF3IP2O43734 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
TRAF3IP2O43734 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAF3IP2O43734 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.96■□□□□ 0.3
TRAF3IP2O43734 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAF3IP2O43734 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAF3IP2O43734 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRAF3IP2O43734 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAF3IP2O43734 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRAF3IP2O43734 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
TRAF3IP2O43734 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.96■□□□□ 0.3
TRAF3IP2O43734 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
TRAF3IP2O43734 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
TRAF3IP2O43734 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TRAF3IP2O43734 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF3IP2O43734 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF3IP2O43734 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAF3IP2O43734 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
TRAF3IP2O43734 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF3IP2O43734 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
TRAF3IP2O43734 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAF3IP2O43734 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAF3IP2O43734 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms