Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF13O43567 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF13O43567 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF13O43567 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
RNF13O43567 ESRRAP1-201ENST00000400596 1257 ntBASIC17.34■□□□□ 0.37
RNF13O43567 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF13O43567 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF13O43567 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF13O43567 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF13O43567 AL049812.1-201ENST00000432563 2267 ntBASIC17.34■□□□□ 0.37
RNF13O43567 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF13O43567 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF13O43567 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF13O43567 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
RNF13O43567 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF13O43567 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF13O43567 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.34■□□□□ 0.37
RNF13O43567 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.34■□□□□ 0.37
RNF13O43567 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
RNF13O43567 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.34■□□□□ 0.37
RNF13O43567 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF13O43567 TEX21P-204ENST00000641479 1693 ntBASIC17.34■□□□□ 0.37
RNF13O43567 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF13O43567 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF13O43567 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.33■□□□□ 0.37
RNF13O43567 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF13O43567 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF13O43567 AL161938.1-201ENST00000569833 2180 ntBASIC17.33■□□□□ 0.37
RNF13O43567 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF13O43567 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RNF13O43567 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
RNF13O43567 SDHAP1-207ENST00000440850 2000 ntBASIC17.33■□□□□ 0.37
RNF13O43567 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.33■□□□□ 0.37
RNF13O43567 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF13O43567 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF13O43567 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF13O43567 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF13O43567 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF13O43567 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
RNF13O43567 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RNF13O43567 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF13O43567 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF13O43567 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.33■□□□□ 0.36
RNF13O43567 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
RNF13O43567 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RNF13O43567 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF13O43567 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF13O43567 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF13O43567 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF13O43567 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.33■□□□□ 0.36
RNF13O43567 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF13O43567 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF13O43567 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF13O43567 MTDHP1-201ENST00000605323 784 ntBASIC17.33■□□□□ 0.36
RNF13O43567 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF13O43567 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
RNF13O43567 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF13O43567 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
RNF13O43567 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RNF13O43567 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF13O43567 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RNF13O43567 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF13O43567 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
RNF13O43567 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF13O43567 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RNF13O43567 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RNF13O43567 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF13O43567 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.32■□□□□ 0.36
RNF13O43567 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF13O43567 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF13O43567 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF13O43567 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF13O43567 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RNF13O43567 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF13O43567 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF13O43567 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF13O43567 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF13O43567 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF13O43567 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF13O43567 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF13O43567 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF13O43567 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF13O43567 AC233263.1-201ENST00000578059 224 ntBASIC17.32■□□□□ 0.36
RNF13O43567 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF13O43567 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF13O43567 AC141586.3-201ENST00000562166 1838 ntBASIC17.32■□□□□ 0.36
RNF13O43567 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RNF13O43567 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF13O43567 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF13O43567 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF13O43567 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF13O43567 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF13O43567 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF13O43567 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF13O43567 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
RNF13O43567 AC090340.1-201ENST00000620778 4980 ntBASIC17.31■□□□□ 0.36
RNF13O43567 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF13O43567 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF13O43567 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF13O43567 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms