Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.54■□□□□ 0.4
TO15178 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.54■□□□□ 0.4
TO15178 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TO15178 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TO15178 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TO15178 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TO15178 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TO15178 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.54■□□□□ 0.4
TO15178 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TO15178 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TO15178 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TO15178 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.54■□□□□ 0.4
TO15178 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.54■□□□□ 0.4
TO15178 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TO15178 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TO15178 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TO15178 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
TO15178 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.54■□□□□ 0.4
TO15178 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TO15178 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.53■□□□□ 0.4
TO15178 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TO15178 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TO15178 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TO15178 AL161938.1-201ENST00000569833 2180 ntBASIC17.53■□□□□ 0.4
TO15178 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TO15178 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TO15178 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TO15178 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TO15178 MIR1238-201ENST00000408483 83 ntBASIC17.53■□□□□ 0.4
TO15178 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TO15178 BX088651.1-201ENST00000540551 451 ntBASIC17.53■□□□□ 0.4
TO15178 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
TO15178 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.53■□□□□ 0.4
TO15178 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TO15178 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TO15178 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TO15178 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.53■□□□□ 0.4
TO15178 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TO15178 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TO15178 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TO15178 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TO15178 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.52■□□□□ 0.4
TO15178 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.52■□□□□ 0.4
TO15178 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.52■□□□□ 0.4
TO15178 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.52■□□□□ 0.4
TO15178 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
TO15178 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.52■□□□□ 0.4
TO15178 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TO15178 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.52■□□□□ 0.4
TO15178 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TO15178 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TO15178 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.52■□□□□ 0.4
TO15178 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TO15178 MMP23A-201ENST00000234610 1017 ntBASIC17.52■□□□□ 0.4
TO15178 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TO15178 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TO15178 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.52■□□□□ 0.4
TO15178 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.52■□□□□ 0.4
TO15178 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.52■□□□□ 0.4
TO15178 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TO15178 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TO15178 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.52■□□□□ 0.4
TO15178 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.52■□□□□ 0.4
TO15178 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TO15178 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.52■□□□□ 0.4
TO15178 KRT8P3-201ENST00000519669 1449 ntBASIC17.52■□□□□ 0.4
TO15178 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TO15178 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TO15178 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.52■□□□□ 0.39
TO15178 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TO15178 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TO15178 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
TO15178 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.52■□□□□ 0.39
TO15178 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TO15178 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
TO15178 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TO15178 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TO15178 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TO15178 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TO15178 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TO15178 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
TO15178 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TO15178 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TO15178 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TO15178 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TO15178 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TO15178 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TO15178 AL390955.1-201ENST00000428694 934 ntBASIC17.51■□□□□ 0.39
TO15178 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.51■□□□□ 0.39
TO15178 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TO15178 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.51■□□□□ 0.39
TO15178 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.51■□□□□ 0.39
TO15178 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TO15178 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.51■□□□□ 0.39
TO15178 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TO15178 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TO15178 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TO15178 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.51■□□□□ 0.39
TO15178 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TO15178 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms