Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH17O14917 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PCDH17O14917 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDH17O14917 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH17O14917 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDH17O14917 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
PCDH17O14917 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH17O14917 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH17O14917 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDH17O14917 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PCDH17O14917 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PCDH17O14917 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH17O14917 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH17O14917 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH17O14917 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH17O14917 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH17O14917 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PCDH17O14917 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH17O14917 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
PCDH17O14917 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH17O14917 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH17O14917 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH17O14917 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH17O14917 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PCDH17O14917 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDH17O14917 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH17O14917 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH17O14917 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH17O14917 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH17O14917 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDH17O14917 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH17O14917 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH17O14917 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH17O14917 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDH17O14917 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH17O14917 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.17■□□□□ 0.5
PCDH17O14917 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDH17O14917 B3GAT3P1-201ENST00000471720 806 ntBASIC18.17■□□□□ 0.5
PCDH17O14917 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.17■□□□□ 0.5
PCDH17O14917 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH17O14917 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDH17O14917 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDH17O14917 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PCDH17O14917 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH17O14917 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDH17O14917 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PCDH17O14917 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH17O14917 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH17O14917 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDH17O14917 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PCDH17O14917 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH17O14917 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH17O14917 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH17O14917 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH17O14917 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH17O14917 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PCDH17O14917 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH17O14917 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDH17O14917 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH17O14917 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH17O14917 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDH17O14917 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.16■□□□□ 0.5
PCDH17O14917 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDH17O14917 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
PCDH17O14917 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.16■□□□□ 0.5
PCDH17O14917 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PCDH17O14917 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDH17O14917 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDH17O14917 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDH17O14917 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.16■□□□□ 0.5
PCDH17O14917 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDH17O14917 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH17O14917 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
PCDH17O14917 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH17O14917 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH17O14917 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH17O14917 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDH17O14917 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH17O14917 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH17O14917 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH17O14917 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH17O14917 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDH17O14917 AC079598.2-202ENST00000546624 1451 ntBASIC18.15■□□□□ 0.5
PCDH17O14917 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH17O14917 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH17O14917 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH17O14917 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH17O14917 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDH17O14917 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH17O14917 AC004951.3-201ENST00000418645 1148 ntBASIC18.15■□□□□ 0.5
PCDH17O14917 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDH17O14917 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH17O14917 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDH17O14917 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.15■□□□□ 0.5
PCDH17O14917 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDH17O14917 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDH17O14917 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH17O14917 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH17O14917 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH17O14917 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms