Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.2■□□□□ 0.18
SDCBPO00560 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SDCBPO00560 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SDCBPO00560 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SDCBPO00560 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SDCBPO00560 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SDCBPO00560 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SDCBPO00560 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SDCBPO00560 AC069152.1-201ENST00000438030 544 ntBASIC16.2■□□□□ 0.18
SDCBPO00560 AC060766.5-201ENST00000590539 871 ntBASIC16.2■□□□□ 0.18
SDCBPO00560 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SDCBPO00560 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SDCBPO00560 AL031598.1-201ENST00000561511 1773 ntBASIC16.2■□□□□ 0.18
SDCBPO00560 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.2■□□□□ 0.18
SDCBPO00560 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
SDCBPO00560 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SDCBPO00560 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SDCBPO00560 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SDCBPO00560 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SDCBPO00560 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.19■□□□□ 0.18
SDCBPO00560 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SDCBPO00560 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SDCBPO00560 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.19■□□□□ 0.18
SDCBPO00560 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SDCBPO00560 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.19■□□□□ 0.18
SDCBPO00560 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SDCBPO00560 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
SDCBPO00560 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SDCBPO00560 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SDCBPO00560 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.19■□□□□ 0.18
SDCBPO00560 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SDCBPO00560 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SDCBPO00560 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.19■□□□□ 0.18
SDCBPO00560 RPS2P52-201ENST00000469610 820 ntBASIC16.19■□□□□ 0.18
SDCBPO00560 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.19■□□□□ 0.18
SDCBPO00560 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.19■□□□□ 0.18
SDCBPO00560 PNMA6B-201ENST00000538162 1200 ntBASIC16.19■□□□□ 0.18
SDCBPO00560 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.19■□□□□ 0.18
SDCBPO00560 AC083880.1-201ENST00000608266 535 ntBASIC16.19■□□□□ 0.18
SDCBPO00560 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.19■□□□□ 0.18
SDCBPO00560 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SDCBPO00560 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.19■□□□□ 0.18
SDCBPO00560 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SDCBPO00560 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SDCBPO00560 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.19■□□□□ 0.18
SDCBPO00560 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.18■□□□□ 0.18
SDCBPO00560 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.18■□□□□ 0.18
SDCBPO00560 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.18■□□□□ 0.18
SDCBPO00560 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SDCBPO00560 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SDCBPO00560 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.18■□□□□ 0.18
SDCBPO00560 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SDCBPO00560 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SDCBPO00560 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SDCBPO00560 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SDCBPO00560 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SDCBPO00560 AC124283.5-201ENST00000624661 1809 ntBASIC16.18■□□□□ 0.18
SDCBPO00560 AL355802.2-201ENST00000402069 882 ntBASIC16.18■□□□□ 0.18
SDCBPO00560 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.18■□□□□ 0.18
SDCBPO00560 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.18■□□□□ 0.18
SDCBPO00560 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.18■□□□□ 0.18
SDCBPO00560 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.18■□□□□ 0.18
SDCBPO00560 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.18■□□□□ 0.18
SDCBPO00560 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.18■□□□□ 0.18
SDCBPO00560 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.18■□□□□ 0.18
SDCBPO00560 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SDCBPO00560 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SDCBPO00560 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SDCBPO00560 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SDCBPO00560 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SDCBPO00560 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SDCBPO00560 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SDCBPO00560 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SDCBPO00560 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SDCBPO00560 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.17■□□□□ 0.18
SDCBPO00560 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SDCBPO00560 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SDCBPO00560 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SDCBPO00560 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SDCBPO00560 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SDCBPO00560 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SDCBPO00560 FZD10-202ENST00000539839 3282 ntBASIC16.17■□□□□ 0.18
SDCBPO00560 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.17■□□□□ 0.18
SDCBPO00560 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SDCBPO00560 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SDCBPO00560 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SDCBPO00560 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.17■□□□□ 0.18
SDCBPO00560 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SDCBPO00560 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.17■□□□□ 0.18
SDCBPO00560 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.17■□□□□ 0.18
SDCBPO00560 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.17■□□□□ 0.18
SDCBPO00560 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.17■□□□□ 0.18
SDCBPO00560 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.17■□□□□ 0.18
SDCBPO00560 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SDCBPO00560 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SDCBPO00560 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
SDCBPO00560 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.17■□□□□ 0.18
SDCBPO00560 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SDCBPO00560 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SDCBPO00560 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms