Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
LINC01548A6NM66 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01548A6NM66 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01548A6NM66 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC15.03■□□□□ -0
LINC01548A6NM66 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC01548A6NM66 LINC01568-207ENST00000641790 1380 ntBASIC15.03■□□□□ -0
LINC01548A6NM66 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.03■□□□□ -0
LINC01548A6NM66 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.03■□□□□ -0
LINC01548A6NM66 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.03■□□□□ -0
LINC01548A6NM66 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.03■□□□□ -0
LINC01548A6NM66 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.03■□□□□ -0
LINC01548A6NM66 PRSS44-201ENST00000515154 1146 ntBASIC15.03■□□□□ -0
LINC01548A6NM66 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.03■□□□□ -0
LINC01548A6NM66 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.03■□□□□ -0
LINC01548A6NM66 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC01548A6NM66 AC012306.2-201ENST00000609350 630 ntBASIC15.03■□□□□ -0
LINC01548A6NM66 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01548A6NM66 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC01548A6NM66 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01548A6NM66 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01548A6NM66 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01548A6NM66 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01548A6NM66 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.03■□□□□ -0
LINC01548A6NM66 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
LINC01548A6NM66 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01548A6NM66 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01548A6NM66 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
LINC01548A6NM66 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC01548A6NM66 AL049812.1-201ENST00000432563 2267 ntBASIC15.03■□□□□ -0
LINC01548A6NM66 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC15.03■□□□□ -0
LINC01548A6NM66 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC15.02■□□□□ -0
LINC01548A6NM66 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC15.02■□□□□ -0
LINC01548A6NM66 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC15.02■□□□□ -0
LINC01548A6NM66 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LINC01548A6NM66 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC15.02■□□□□ -0
LINC01548A6NM66 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
LINC01548A6NM66 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LINC01548A6NM66 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.02■□□□□ -0
LINC01548A6NM66 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
LINC01548A6NM66 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LINC01548A6NM66 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.02■□□□□ -0
LINC01548A6NM66 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.02■□□□□ -0
LINC01548A6NM66 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.02■□□□□ -0
LINC01548A6NM66 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC01548A6NM66 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC01548A6NM66 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC01548A6NM66 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
LINC01548A6NM66 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC15.02□□□□□ -0.01
LINC01548A6NM66 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC01548A6NM66 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC01548A6NM66 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
LINC01548A6NM66 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC01548A6NM66 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LINC01548A6NM66 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC01548A6NM66 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.01□□□□□ -0.01
LINC01548A6NM66 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.01□□□□□ -0.01
LINC01548A6NM66 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
LINC01548A6NM66 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01548A6NM66 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01548A6NM66 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LINC01548A6NM66 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01548A6NM66 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01548A6NM66 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
LINC01548A6NM66 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01548A6NM66 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.01□□□□□ -0.01
LINC01548A6NM66 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.01□□□□□ -0.01
LINC01548A6NM66 ECEL1P2-202ENST00000465689 757 ntBASIC15.01□□□□□ -0.01
LINC01548A6NM66 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.01□□□□□ -0.01
LINC01548A6NM66 C2orf69P3-201ENST00000565542 1120 ntBASIC15.01□□□□□ -0.01
LINC01548A6NM66 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.01□□□□□ -0.01
LINC01548A6NM66 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
LINC01548A6NM66 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01548A6NM66 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01548A6NM66 AC097493.4-201ENST00000641197 219 ntBASIC15.01□□□□□ -0.01
LINC01548A6NM66 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01548A6NM66 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01548A6NM66 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC15.01□□□□□ -0.01
LINC01548A6NM66 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.01□□□□□ -0.01
LINC01548A6NM66 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01548A6NM66 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01548A6NM66 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.01□□□□□ -0.01
LINC01548A6NM66 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01548A6NM66 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC01548A6NM66 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC01548A6NM66 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15□□□□□ -0.01
LINC01548A6NM66 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
LINC01548A6NM66 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC01548A6NM66 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15□□□□□ -0.01
LINC01548A6NM66 AIRN-201ENST00000601203 4374 ntBASIC15□□□□□ -0.01
LINC01548A6NM66 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
LINC01548A6NM66 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC01548A6NM66 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
LINC01548A6NM66 TSPY14P-201ENST00000303979 915 ntBASIC15□□□□□ -0.01
LINC01548A6NM66 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LINC01548A6NM66 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15□□□□□ -0.01
LINC01548A6NM66 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15□□□□□ -0.01
LINC01548A6NM66 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15□□□□□ -0.01
LINC01548A6NM66 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15□□□□□ -0.01
LINC01548A6NM66 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LINC01548A6NM66 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms