Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.54■□□□□ 0.88
LRRC53A6NM62 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC53A6NM62 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC53A6NM62 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC53A6NM62 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC53A6NM62 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC53A6NM62 TSPY21P-201ENST00000433481 731 ntBASIC20.54■□□□□ 0.88
LRRC53A6NM62 TSPY23P-201ENST00000440136 739 ntBASIC20.54■□□□□ 0.88
LRRC53A6NM62 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.54■□□□□ 0.88
LRRC53A6NM62 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.54■□□□□ 0.88
LRRC53A6NM62 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC53A6NM62 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.54■□□□□ 0.88
LRRC53A6NM62 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC53A6NM62 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC53A6NM62 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.54■□□□□ 0.88
LRRC53A6NM62 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.54■□□□□ 0.88
LRRC53A6NM62 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.54■□□□□ 0.88
LRRC53A6NM62 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC53A6NM62 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC53A6NM62 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.54■□□□□ 0.88
LRRC53A6NM62 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC53A6NM62 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
LRRC53A6NM62 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC53A6NM62 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
LRRC53A6NM62 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC53A6NM62 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.54■□□□□ 0.88
LRRC53A6NM62 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC53A6NM62 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.53■□□□□ 0.88
LRRC53A6NM62 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC53A6NM62 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC53A6NM62 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC53A6NM62 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
LRRC53A6NM62 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC53A6NM62 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC53A6NM62 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.53■□□□□ 0.88
LRRC53A6NM62 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.53■□□□□ 0.88
LRRC53A6NM62 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.53■□□□□ 0.88
LRRC53A6NM62 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.53■□□□□ 0.88
LRRC53A6NM62 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.53■□□□□ 0.88
LRRC53A6NM62 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.53■□□□□ 0.88
LRRC53A6NM62 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC53A6NM62 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.53■□□□□ 0.88
LRRC53A6NM62 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.53■□□□□ 0.88
LRRC53A6NM62 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC53A6NM62 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC53A6NM62 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.53■□□□□ 0.88
LRRC53A6NM62 AC135050.7-201ENST00000624508 2218 ntBASIC20.53■□□□□ 0.88
LRRC53A6NM62 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC53A6NM62 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
LRRC53A6NM62 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC53A6NM62 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC53A6NM62 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC53A6NM62 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.52■□□□□ 0.88
LRRC53A6NM62 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.52■□□□□ 0.88
LRRC53A6NM62 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC53A6NM62 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC53A6NM62 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC53A6NM62 HLA-L-209ENST00000420110 1011 ntBASIC20.52■□□□□ 0.88
LRRC53A6NM62 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.52■□□□□ 0.88
LRRC53A6NM62 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC53A6NM62 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
LRRC53A6NM62 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
LRRC53A6NM62 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC53A6NM62 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC53A6NM62 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC53A6NM62 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
LRRC53A6NM62 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC53A6NM62 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
LRRC53A6NM62 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.52■□□□□ 0.87
LRRC53A6NM62 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.52■□□□□ 0.87
LRRC53A6NM62 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC53A6NM62 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC53A6NM62 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
LRRC53A6NM62 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC53A6NM62 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC53A6NM62 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.51■□□□□ 0.87
LRRC53A6NM62 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
LRRC53A6NM62 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.51■□□□□ 0.87
LRRC53A6NM62 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
LRRC53A6NM62 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.51■□□□□ 0.87
LRRC53A6NM62 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC53A6NM62 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC53A6NM62 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.51■□□□□ 0.87
LRRC53A6NM62 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC53A6NM62 AC233263.1-201ENST00000578059 224 ntBASIC20.51■□□□□ 0.87
LRRC53A6NM62 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.51■□□□□ 0.87
LRRC53A6NM62 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC53A6NM62 AC069544.1-201ENST00000609399 999 ntBASIC20.51■□□□□ 0.87
LRRC53A6NM62 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC53A6NM62 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC53A6NM62 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
LRRC53A6NM62 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC53A6NM62 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC53A6NM62 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC53A6NM62 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC53A6NM62 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.51■□□□□ 0.87
LRRC53A6NM62 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.51■□□□□ 0.87
LRRC53A6NM62 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.5■□□□□ 0.87
LRRC53A6NM62 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC53A6NM62 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms