Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
MBD3L3A6NE82 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MBD3L3A6NE82 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MBD3L3A6NE82 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
MBD3L3A6NE82 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.75■□□□□ 0.27
MBD3L3A6NE82 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MBD3L3A6NE82 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MBD3L3A6NE82 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.75■□□□□ 0.27
MBD3L3A6NE82 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
MBD3L3A6NE82 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.75■□□□□ 0.27
MBD3L3A6NE82 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.75■□□□□ 0.27
MBD3L3A6NE82 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MBD3L3A6NE82 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.74■□□□□ 0.27
MBD3L3A6NE82 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MBD3L3A6NE82 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MBD3L3A6NE82 AC036111.1-201ENST00000533973 1582 ntBASIC16.74■□□□□ 0.27
MBD3L3A6NE82 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MBD3L3A6NE82 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.74■□□□□ 0.27
MBD3L3A6NE82 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MBD3L3A6NE82 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MBD3L3A6NE82 PCED1CP-201ENST00000419887 785 ntBASIC16.74■□□□□ 0.27
MBD3L3A6NE82 UPK3BP1-201ENST00000428678 509 ntBASIC16.74■□□□□ 0.27
MBD3L3A6NE82 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MBD3L3A6NE82 AC112907.2-201ENST00000448639 330 ntBASIC16.74■□□□□ 0.27
MBD3L3A6NE82 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MBD3L3A6NE82 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MBD3L3A6NE82 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.74■□□□□ 0.27
MBD3L3A6NE82 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MBD3L3A6NE82 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MBD3L3A6NE82 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MBD3L3A6NE82 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MBD3L3A6NE82 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.74■□□□□ 0.27
MBD3L3A6NE82 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MBD3L3A6NE82 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MBD3L3A6NE82 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
MBD3L3A6NE82 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
MBD3L3A6NE82 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
MBD3L3A6NE82 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MBD3L3A6NE82 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MBD3L3A6NE82 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MBD3L3A6NE82 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.72■□□□□ 0.27
MBD3L3A6NE82 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
MBD3L3A6NE82 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MBD3L3A6NE82 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
MBD3L3A6NE82 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.72■□□□□ 0.27
MBD3L3A6NE82 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
MBD3L3A6NE82 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MBD3L3A6NE82 SPDYE15P-201ENST00000424157 909 ntBASIC16.72■□□□□ 0.27
MBD3L3A6NE82 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MBD3L3A6NE82 AC034232.1-201ENST00000506026 1064 ntBASIC16.72■□□□□ 0.27
MBD3L3A6NE82 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MBD3L3A6NE82 AL136038.3-201ENST00000561909 1096 ntBASIC16.72■□□□□ 0.27
MBD3L3A6NE82 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.72■□□□□ 0.27
MBD3L3A6NE82 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
MBD3L3A6NE82 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.72■□□□□ 0.27
MBD3L3A6NE82 HYMAI.1-201ENST00000620949 238 ntBASIC16.72■□□□□ 0.27
MBD3L3A6NE82 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.72■□□□□ 0.27
MBD3L3A6NE82 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.72■□□□□ 0.27
MBD3L3A6NE82 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MBD3L3A6NE82 IER3-202ENST00000376377 1350 ntBASIC16.72■□□□□ 0.27
MBD3L3A6NE82 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
MBD3L3A6NE82 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MBD3L3A6NE82 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MBD3L3A6NE82 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MBD3L3A6NE82 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms