Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MEIS3P1A6NDR6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
MEIS3P1A6NDR6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
MEIS3P1A6NDR6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.34■□□□□ 0.21
MEIS3P1A6NDR6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.34■□□□□ 0.21
MEIS3P1A6NDR6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MEIS3P1A6NDR6 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.34■□□□□ 0.21
MEIS3P1A6NDR6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.34■□□□□ 0.21
MEIS3P1A6NDR6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MEIS3P1A6NDR6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.34■□□□□ 0.21
MEIS3P1A6NDR6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MEIS3P1A6NDR6 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
MEIS3P1A6NDR6 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.34■□□□□ 0.21
MEIS3P1A6NDR6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
MEIS3P1A6NDR6 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MEIS3P1A6NDR6 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MEIS3P1A6NDR6 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MEIS3P1A6NDR6 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
MEIS3P1A6NDR6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
MEIS3P1A6NDR6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
MEIS3P1A6NDR6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
MEIS3P1A6NDR6 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
MEIS3P1A6NDR6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.33■□□□□ 0.21
MEIS3P1A6NDR6 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.33■□□□□ 0.21
MEIS3P1A6NDR6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.33■□□□□ 0.21
MEIS3P1A6NDR6 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.33■□□□□ 0.21
MEIS3P1A6NDR6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
MEIS3P1A6NDR6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
MEIS3P1A6NDR6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
MEIS3P1A6NDR6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
MEIS3P1A6NDR6 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.33■□□□□ 0.21
MEIS3P1A6NDR6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
MEIS3P1A6NDR6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MEIS3P1A6NDR6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MEIS3P1A6NDR6 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.33■□□□□ 0.2
MEIS3P1A6NDR6 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.33■□□□□ 0.2
MEIS3P1A6NDR6 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
MEIS3P1A6NDR6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
MEIS3P1A6NDR6 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MEIS3P1A6NDR6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.33■□□□□ 0.2
MEIS3P1A6NDR6 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
MEIS3P1A6NDR6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.33■□□□□ 0.2
MEIS3P1A6NDR6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.33■□□□□ 0.2
MEIS3P1A6NDR6 C2orf69P4-201ENST00000565394 541 ntBASIC16.33■□□□□ 0.2
MEIS3P1A6NDR6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MEIS3P1A6NDR6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.33■□□□□ 0.2
MEIS3P1A6NDR6 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MEIS3P1A6NDR6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.33■□□□□ 0.2
MEIS3P1A6NDR6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
MEIS3P1A6NDR6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
MEIS3P1A6NDR6 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
MEIS3P1A6NDR6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MEIS3P1A6NDR6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.33■□□□□ 0.2
MEIS3P1A6NDR6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MEIS3P1A6NDR6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
MEIS3P1A6NDR6 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.33■□□□□ 0.2
MEIS3P1A6NDR6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.2
MEIS3P1A6NDR6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MEIS3P1A6NDR6 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.32■□□□□ 0.2
MEIS3P1A6NDR6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
MEIS3P1A6NDR6 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.32■□□□□ 0.2
MEIS3P1A6NDR6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MEIS3P1A6NDR6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MEIS3P1A6NDR6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.32■□□□□ 0.2
MEIS3P1A6NDR6 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MEIS3P1A6NDR6 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
MEIS3P1A6NDR6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MEIS3P1A6NDR6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MEIS3P1A6NDR6 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.32■□□□□ 0.2
MEIS3P1A6NDR6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MEIS3P1A6NDR6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
MEIS3P1A6NDR6 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MEIS3P1A6NDR6 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MEIS3P1A6NDR6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.32■□□□□ 0.2
MEIS3P1A6NDR6 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.32■□□□□ 0.2
MEIS3P1A6NDR6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
MEIS3P1A6NDR6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
MEIS3P1A6NDR6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.32■□□□□ 0.2
MEIS3P1A6NDR6 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
MEIS3P1A6NDR6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.32■□□□□ 0.2
MEIS3P1A6NDR6 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
MEIS3P1A6NDR6 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MEIS3P1A6NDR6 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MEIS3P1A6NDR6 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MEIS3P1A6NDR6 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MEIS3P1A6NDR6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MEIS3P1A6NDR6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
MEIS3P1A6NDR6 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.31■□□□□ 0.2
MEIS3P1A6NDR6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.31■□□□□ 0.2
MEIS3P1A6NDR6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MEIS3P1A6NDR6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MEIS3P1A6NDR6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MEIS3P1A6NDR6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.31■□□□□ 0.2
MEIS3P1A6NDR6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.31■□□□□ 0.2
MEIS3P1A6NDR6 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
MEIS3P1A6NDR6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.31■□□□□ 0.2
MEIS3P1A6NDR6 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
MEIS3P1A6NDR6 AC068338.2-201ENST00000563278 1430 ntBASIC16.31■□□□□ 0.2
MEIS3P1A6NDR6 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MEIS3P1A6NDR6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms