Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-6A0A0B4J262 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-6A0A0B4J262 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-6A0A0B4J262 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAV8-6A0A0B4J262 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRAV8-6A0A0B4J262 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-6A0A0B4J262 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRAV8-6A0A0B4J262 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAV8-6A0A0B4J262 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC14.03□□□□□ -0.16
TRAV8-6A0A0B4J262 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV8-6A0A0B4J262 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAV8-6A0A0B4J262 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
TRAV8-6A0A0B4J262 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-6A0A0B4J262 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRAV8-6A0A0B4J262 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-6A0A0B4J262 AC016405.3-201ENST00000607710 860 ntBASIC14.03□□□□□ -0.16
TRAV8-6A0A0B4J262 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV8-6A0A0B4J262 MIR2861-201ENST00000636310 90 ntBASIC14.03□□□□□ -0.16
TRAV8-6A0A0B4J262 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-6A0A0B4J262 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TRAV8-6A0A0B4J262 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-6A0A0B4J262 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-6A0A0B4J262 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-6A0A0B4J262 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRAV8-6A0A0B4J262 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
TRAV8-6A0A0B4J262 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV8-6A0A0B4J262 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAV8-6A0A0B4J262 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-6A0A0B4J262 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
TRAV8-6A0A0B4J262 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-6A0A0B4J262 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV8-6A0A0B4J262 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV8-6A0A0B4J262 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
TRAV8-6A0A0B4J262 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV8-6A0A0B4J262 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV8-6A0A0B4J262 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV8-6A0A0B4J262 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV8-6A0A0B4J262 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV8-6A0A0B4J262 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV8-6A0A0B4J262 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV8-6A0A0B4J262 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV8-6A0A0B4J262 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV8-6A0A0B4J262 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
TRAV8-6A0A0B4J262 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAV8-6A0A0B4J262 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV8-6A0A0B4J262 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC14.02□□□□□ -0.16
TRAV8-6A0A0B4J262 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAV8-6A0A0B4J262 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
TRAV8-6A0A0B4J262 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV8-6A0A0B4J262 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAV8-6A0A0B4J262 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV8-6A0A0B4J262 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TRAV8-6A0A0B4J262 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV8-6A0A0B4J262 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV8-6A0A0B4J262 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC14.02□□□□□ -0.17
TRAV8-6A0A0B4J262 PLLP-204ENST00000569059 665 ntTSL 3 BASIC14.02□□□□□ -0.17
TRAV8-6A0A0B4J262 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.02□□□□□ -0.17
TRAV8-6A0A0B4J262 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV8-6A0A0B4J262 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV8-6A0A0B4J262 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
TRAV8-6A0A0B4J262 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV8-6A0A0B4J262 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV8-6A0A0B4J262 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV8-6A0A0B4J262 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV8-6A0A0B4J262 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV8-6A0A0B4J262 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV8-6A0A0B4J262 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV8-6A0A0B4J262 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV8-6A0A0B4J262 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV8-6A0A0B4J262 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV8-6A0A0B4J262 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-6A0A0B4J262 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-6A0A0B4J262 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV8-6A0A0B4J262 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-6A0A0B4J262 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-6A0A0B4J262 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-6A0A0B4J262 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TRAV8-6A0A0B4J262 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-6A0A0B4J262 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC14.01□□□□□ -0.17
TRAV8-6A0A0B4J262 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV8-6A0A0B4J262 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-6A0A0B4J262 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-6A0A0B4J262 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-6A0A0B4J262 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-6A0A0B4J262 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-6A0A0B4J262 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-6A0A0B4J262 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-6A0A0B4J262 AC087633.2-202ENST00000565166 1439 ntBASIC14.01□□□□□ -0.17
TRAV8-6A0A0B4J262 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-6A0A0B4J262 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-6A0A0B4J262 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TRAV8-6A0A0B4J262 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-6A0A0B4J262 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRAV8-6A0A0B4J262 MIR663A-201ENST00000385250 93 ntBASIC14.01□□□□□ -0.17
TRAV8-6A0A0B4J262 AL512625.2-201ENST00000417533 625 ntBASIC14.01□□□□□ -0.17
TRAV8-6A0A0B4J262 APTR-203ENST00000430801 583 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV8-6A0A0B4J262 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-6A0A0B4J262 CDCA4P2-201ENST00000441182 718 ntBASIC14.01□□□□□ -0.17
TRAV8-6A0A0B4J262 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC14.01□□□□□ -0.17
TRAV8-6A0A0B4J262 HES2-205ENST00000487437 968 ntTSL 3 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms