Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 MMP23A-201ENST00000234610 1017 ntBASIC17.34■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.34■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.34■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.34■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 AC012306.2-201ENST00000609350 630 ntBASIC17.34■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.34■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 AC097493.4-201ENST00000641197 219 ntBASIC17.34■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.33■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.33■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.33■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.33■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.33■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 AC079598.2-202ENST00000546624 1451 ntBASIC17.33■□□□□ 0.37
TNFSF12-TNFSF13A0A0A6YY99 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.33■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 UNC93B2-201ENST00000285383 730 ntBASIC17.33■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 AC008040.2-201ENST00000461049 708 ntBASIC17.33■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.33■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.33■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.33■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.33■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 FP475955.4-201ENST00000623131 1990 ntBASIC17.33■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 IRX1P1-201ENST00000438849 1838 ntBASIC17.33■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.32■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.32■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 KRT8P11-201ENST00000409686 1436 ntBASIC17.32■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.32■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.32■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 FAM207BP-201ENST00000447172 505 ntBASIC17.32■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 PRSS44-201ENST00000515154 1146 ntBASIC17.32■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 AP000525.1-201ENST00000608286 694 ntBASIC17.32■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.32■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.32■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.32■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 FEM1AP3-201ENST00000403722 1741 ntBASIC17.32■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.32■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.31■□□□□ 0.36
TNFSF12-TNFSF13A0A0A6YY99 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms