Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV27A0A087WT01 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV27A0A087WT01 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TRAV27A0A087WT01 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV27A0A087WT01 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV27A0A087WT01 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV27A0A087WT01 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.27■□□□□ 0.36
TRAV27A0A087WT01 WIZP1-201ENST00000531444 2299 ntBASIC17.27■□□□□ 0.36
TRAV27A0A087WT01 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV27A0A087WT01 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV27A0A087WT01 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.27■□□□□ 0.36
TRAV27A0A087WT01 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TRAV27A0A087WT01 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV27A0A087WT01 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV27A0A087WT01 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.27■□□□□ 0.36
TRAV27A0A087WT01 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV27A0A087WT01 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV27A0A087WT01 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV27A0A087WT01 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.27■□□□□ 0.36
TRAV27A0A087WT01 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV27A0A087WT01 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV27A0A087WT01 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV27A0A087WT01 AP003097.1-201ENST00000530657 1135 ntBASIC17.27■□□□□ 0.36
TRAV27A0A087WT01 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV27A0A087WT01 AL512353.2-201ENST00000448759 1962 ntBASIC17.27■□□□□ 0.36
TRAV27A0A087WT01 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV27A0A087WT01 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV27A0A087WT01 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV27A0A087WT01 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV27A0A087WT01 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV27A0A087WT01 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.27■□□□□ 0.35
TRAV27A0A087WT01 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV27A0A087WT01 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV27A0A087WT01 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
TRAV27A0A087WT01 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV27A0A087WT01 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.27■□□□□ 0.35
TRAV27A0A087WT01 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV27A0A087WT01 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.27■□□□□ 0.35
TRAV27A0A087WT01 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV27A0A087WT01 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV27A0A087WT01 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV27A0A087WT01 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV27A0A087WT01 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV27A0A087WT01 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV27A0A087WT01 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
TRAV27A0A087WT01 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
TRAV27A0A087WT01 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV27A0A087WT01 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV27A0A087WT01 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV27A0A087WT01 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV27A0A087WT01 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV27A0A087WT01 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV27A0A087WT01 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.26■□□□□ 0.35
TRAV27A0A087WT01 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAV27A0A087WT01 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.26■□□□□ 0.35
TRAV27A0A087WT01 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV27A0A087WT01 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.26■□□□□ 0.35
TRAV27A0A087WT01 HLA-A-209ENST00000638375 975 ntBASIC17.26■□□□□ 0.35
TRAV27A0A087WT01 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAV27A0A087WT01 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV27A0A087WT01 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV27A0A087WT01 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV27A0A087WT01 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV27A0A087WT01 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
TRAV27A0A087WT01 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV27A0A087WT01 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV27A0A087WT01 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.26■□□□□ 0.35
TRAV27A0A087WT01 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV27A0A087WT01 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV27A0A087WT01 Z98044.1-201ENST00000632503 1764 ntBASIC17.25■□□□□ 0.35
TRAV27A0A087WT01 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV27A0A087WT01 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
TRAV27A0A087WT01 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAV27A0A087WT01 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV27A0A087WT01 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.25■□□□□ 0.35
TRAV27A0A087WT01 AC093525.10-201ENST00000625130 1569 ntBASIC17.25■□□□□ 0.35
TRAV27A0A087WT01 AC007613.1-201ENST00000572811 2597 ntBASIC17.25■□□□□ 0.35
TRAV27A0A087WT01 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV27A0A087WT01 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV27A0A087WT01 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV27A0A087WT01 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV27A0A087WT01 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV27A0A087WT01 C1QL1P1-201ENST00000568105 661 ntBASIC17.25■□□□□ 0.35
TRAV27A0A087WT01 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TRAV27A0A087WT01 AC233263.1-201ENST00000578059 224 ntBASIC17.25■□□□□ 0.35
TRAV27A0A087WT01 AC069544.1-201ENST00000609399 999 ntBASIC17.25■□□□□ 0.35
TRAV27A0A087WT01 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV27A0A087WT01 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV27A0A087WT01 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAV27A0A087WT01 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV27A0A087WT01 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV27A0A087WT01 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV27A0A087WT01 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV27A0A087WT01 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV27A0A087WT01 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV27A0A087WT01 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV27A0A087WT01 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.24■□□□□ 0.35
TRAV27A0A087WT01 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV27A0A087WT01 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TRAV27A0A087WT01 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms