Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 AC074141.1-201ENST00000588129 2995 ntBASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 KRTAP6-2-201ENST00000334897 313 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 RNA5SP378-201ENST00000363646 120 ntBASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 SNORA24B-201ENST00000384176 131 ntBASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 RNU6-198P-201ENST00000384258 104 ntBASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 MIR555-201ENST00000384987 96 ntBASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 MIR607-201ENST00000385241 96 ntBASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 RNU4-64P-201ENST00000410795 131 ntBASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 BCRP8-201ENST00000412037 255 ntBASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 DEFA11P-201ENST00000446470 261 ntBASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 AC245517.4-201ENST00000448601 281 ntBASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 AC005165.2-201ENST00000466070 380 ntBASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 RN7SL180P-201ENST00000466769 294 ntBASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 AC021074.2-201ENST00000468434 172 ntBASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 RN7SL36P-201ENST00000469345 276 ntBASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 RN7SL687P-201ENST00000480496 285 ntBASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 SNRPCP14-201ENST00000524498 205 ntBASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 SAA3P-201ENST00000533267 365 ntBASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 AL109628.2-201ENST00000554037 201 ntBASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 OR1E3-201ENST00000575608 948 ntBASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 MIR4682-201ENST00000580643 80 ntBASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 APOC2-202ENST00000585786 880 ntTSL 2 BASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 5S_rRNA.20-201ENST00000612104 118 ntBASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 AC244100.4-201ENST00000617747 388 ntBASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 AC010653.3-201ENST00000635332 232 ntBASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 MIR3120-201ENST00000636555 81 ntBASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 AC009237.3-203ENST00000442128 3551 ntBASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 ANAPC5-218ENST00000541887 2400 ntTSL 5 BASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KRTAP3-3Q9BYR6 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 CEP63-202ENST00000337090 5632 ntAPPRIS P3 TSL 5 BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 MFSD8-218ENST00000641186 4448 ntBASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 PROM1-210ENST00000510224 4006 ntAPPRIS P3 TSL 5 BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 RNU6-1237P-201ENST00000384777 107 ntBASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 MIR575-201ENST00000385013 94 ntBASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 MIR452-201ENST00000385020 85 ntBASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 MIR516B2-201ENST00000385190 85 ntBASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 MIR136-201ENST00000385207 82 ntBASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 AL356095.1-201ENST00000417217 199 ntBASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 CELSR3-AS1-201ENST00000421275 196 ntTSL 2 BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 SRSF1P1-201ENST00000424058 520 ntBASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 AL161788.1-201ENST00000441805 169 ntBASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 ATP5J2P3-201ENST00000451550 258 ntBASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 RN7SL636P-201ENST00000497504 294 ntBASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 RNU6-752P-201ENST00000516376 102 ntBASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 RNA5SP168-201ENST00000516642 112 ntBASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 IGLVI-42-201ENST00000522485 381 ntBASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 AC005518.2-201ENST00000603254 282 ntBASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 VPS8-207ENST00000436792 5011 ntAPPRIS ALT1 TSL 2 BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
KRTAP3-3Q9BYR6 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms