Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC011477.1-204ENST00000623416 1325 ntBASIC2.3□□□□□ -2.04
RETP07949 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.3□□□□□ -2.04
RETP07949 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
RETP07949 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RETP07949 MTND5P29-201ENST00000458676 1807 ntBASIC2.29□□□□□ -2.04
RETP07949 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.29□□□□□ -2.04
RETP07949 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.29□□□□□ -2.04
RETP07949 MIR21-201ENST00000362134 72 ntBASIC2.29□□□□□ -2.04
RETP07949 RNA5SP88-201ENST00000365560 109 ntBASIC2.29□□□□□ -2.04
RETP07949 RNU6-1035P-201ENST00000384477 107 ntBASIC2.29□□□□□ -2.04
RETP07949 AL590084.2-201ENST00000401481 382 ntBASIC2.29□□□□□ -2.04
RETP07949 MTND5P25-201ENST00000430499 799 ntBASIC2.29□□□□□ -2.04
RETP07949 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.29□□□□□ -2.04
RETP07949 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.29□□□□□ -2.04
RETP07949 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
RETP07949 MTCO1P27-201ENST00000448269 226 ntBASIC2.29□□□□□ -2.04
RETP07949 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.29□□□□□ -2.04
RETP07949 AC087588.1-201ENST00000462203 316 ntBASIC2.29□□□□□ -2.04
RETP07949 LINC00888-204ENST00000487386 421 ntBASIC2.29□□□□□ -2.04
RETP07949 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.29□□□□□ -2.04
RETP07949 HSPE1P23-201ENST00000509838 286 ntBASIC2.29□□□□□ -2.04
RETP07949 AC024589.1-201ENST00000512207 263 ntBASIC2.29□□□□□ -2.04
RETP07949 RNU6-1129P-201ENST00000515964 104 ntBASIC2.29□□□□□ -2.04
RETP07949 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.29□□□□□ -2.04
RETP07949 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.29□□□□□ -2.04
RETP07949 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.29□□□□□ -2.04
RETP07949 AC135628.1-201ENST00000568867 534 ntBASIC2.29□□□□□ -2.04
RETP07949 AC136618.2-201ENST00000575091 400 ntBASIC2.29□□□□□ -2.04
RETP07949 AL353997.4-201ENST00000586196 166 ntBASIC2.29□□□□□ -2.04
RETP07949 AL357094.1-201ENST00000603845 844 ntBASIC2.29□□□□□ -2.04
RETP07949 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.29□□□□□ -2.04
RETP07949 AC091304.6-201ENST00000619761 202 ntBASIC2.29□□□□□ -2.04
RETP07949 AC131159.1-201ENST00000621854 213 ntBASIC2.29□□□□□ -2.04
RETP07949 AC097520.1-201ENST00000624435 385 ntBASIC2.29□□□□□ -2.04
RETP07949 AL512643.1-201ENST00000635735 524 ntBASIC2.29□□□□□ -2.04
RETP07949 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
RETP07949 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
RETP07949 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.29□□□□□ -2.04
RETP07949 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
RETP07949 MTND4P35-201ENST00000604257 1375 ntBASIC2.28□□□□□ -2.04
RETP07949 AL596028.1-201ENST00000326971 197 ntBASIC2.28□□□□□ -2.04
RETP07949 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
RETP07949 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
RETP07949 RNU6-853P-201ENST00000364306 107 ntBASIC2.28□□□□□ -2.04
RETP07949 SNORA23-201ENST00000365128 182 ntBASIC2.28□□□□□ -2.04
RETP07949 RNU6-637P-201ENST00000384050 107 ntBASIC2.28□□□□□ -2.04
RETP07949 U8.13-201ENST00000390842 128 ntBASIC2.28□□□□□ -2.04
RETP07949 MIR320C1-201ENST00000408566 88 ntBASIC2.28□□□□□ -2.04
RETP07949 Z85995.1-201ENST00000415547 335 ntBASIC2.28□□□□□ -2.04
RETP07949 SPA17P1-201ENST00000416656 452 ntBASIC2.28□□□□□ -2.04
RETP07949 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
RETP07949 AC007919.1-201ENST00000429380 217 ntBASIC2.28□□□□□ -2.04
RETP07949 AL356867.1-201ENST00000429623 299 ntBASIC2.28□□□□□ -2.04
RETP07949 AL512844.2-201ENST00000433990 593 ntBASIC2.28□□□□□ -2.04
RETP07949 MTND5P2-201ENST00000442927 1142 ntBASIC2.28□□□□□ -2.04
RETP07949 PAXBP1P1-201ENST00000449315 447 ntBASIC2.28□□□□□ -2.04
RETP07949 ATG12P2-201ENST00000456830 416 ntBASIC2.28□□□□□ -2.04
RETP07949 AC072039.1-201ENST00000477611 581 ntBASIC2.28□□□□□ -2.04
RETP07949 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.28□□□□□ -2.04
RETP07949 RNU6-840P-201ENST00000517275 65 ntBASIC2.28□□□□□ -2.04
RETP07949 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.28□□□□□ -2.04
RETP07949 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.28□□□□□ -2.04
RETP07949 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.28□□□□□ -2.04
RETP07949 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.28□□□□□ -2.04
RETP07949 MTATP6P15-201ENST00000527233 835 ntBASIC2.28□□□□□ -2.04
RETP07949 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
RETP07949 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.28□□□□□ -2.04
RETP07949 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
RETP07949 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.28□□□□□ -2.04
RETP07949 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.28□□□□□ -2.04
RETP07949 AC021171.1-201ENST00000603137 706 ntBASIC2.28□□□□□ -2.04
RETP07949 AL353778.1-201ENST00000603149 408 ntBASIC2.28□□□□□ -2.04
RETP07949 AL139344.1-201ENST00000605228 195 ntBASIC2.28□□□□□ -2.04
RETP07949 AC090186.1-201ENST00000605991 572 ntBASIC2.28□□□□□ -2.04
RETP07949 AC103710.4-201ENST00000609301 899 ntBASIC2.28□□□□□ -2.04
RETP07949 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
RETP07949 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.28□□□□□ -2.04
RETP07949 AC069528.2-201ENST00000624849 1991 ntBASIC2.28□□□□□ -2.04
RETP07949 AL049641.1-201ENST00000441055 1948 ntBASIC2.27□□□□□ -2.05
RETP07949 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.27□□□□□ -2.05
RETP07949 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
RETP07949 Y_RNA.18-201ENST00000362461 102 ntBASIC2.27□□□□□ -2.05
RETP07949 SNORA68.1-201ENST00000364537 132 ntBASIC2.27□□□□□ -2.05
RETP07949 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.27□□□□□ -2.05
RETP07949 RNU6-723P-201ENST00000383973 107 ntBASIC2.27□□□□□ -2.05
RETP07949 RNU6-1140P-201ENST00000410517 106 ntBASIC2.27□□□□□ -2.05
RETP07949 RNU6-516P-201ENST00000411381 104 ntBASIC2.27□□□□□ -2.05
RETP07949 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.27□□□□□ -2.05
RETP07949 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.27□□□□□ -2.05
RETP07949 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.27□□□□□ -2.05
RETP07949 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.27□□□□□ -2.05
RETP07949 AL592045.1-201ENST00000429867 352 ntBASIC2.27□□□□□ -2.05
RETP07949 RPL7P34-201ENST00000433316 712 ntBASIC2.27□□□□□ -2.05
RETP07949 UBE2V1P13-201ENST00000436983 439 ntBASIC2.27□□□□□ -2.05
RETP07949 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.27□□□□□ -2.05
RETP07949 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.27□□□□□ -2.05
RETP07949 MTCO2P6-201ENST00000463134 685 ntBASIC2.27□□□□□ -2.05
RETP07949 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
RETP07949 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.27□□□□□ -2.05
RETP07949 RNU6-1282P-201ENST00000516735 96 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms