RNA–Protein interactions for RNA: ENST00000364306.1

RNU6-853P-201, Transcript of RNA, U6 small nuclear 853, pseudogene, humanhuman

BASIC

Gene RNU6-853P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-853P-201ENST00000364306 AEBP2Q6ZN18 517 aaPredicted RBP16.96■□□□□ 0.31
RNU6-853P-201ENST00000364306 CHIC1Q5VXU3 224 aa16.89■□□□□ 0.29
RNU6-853P-201ENST00000364306 PHF23Q9BUL5 403 aaPredicted RBP14.82□□□□□ -0.04
RNU6-853P-201ENST00000364306 SENP3Q9H4L4 574 aaPredicted RBP14.44□□□□□ -0.1
RNU6-853P-201ENST00000364306 PLPPR3Q6T4P5 718 aa13.86□□□□□ -0.19
RNU6-853P-201ENST00000364306 FOXD1Q16676 465 aa13.3□□□□□ -0.28
RNU6-853P-201ENST00000364306 ADRA2BP18089 450 aa12.97□□□□□ -0.33
RNU6-853P-201ENST00000364306 PPP6R1Q9UPN7 881 aa12.97□□□□□ -0.33
RNU6-853P-201ENST00000364306 PIAS4Q8N2W9 510 aaPredicted RBP12.62□□□□□ -0.39
RNU6-853P-201ENST00000364306 MSH5O43196 834 aa12.23□□□□□ -0.45
RNU6-853P-201ENST00000364306 KCNA4P22459 653 aa12.2□□□□□ -0.46
RNU6-853P-201ENST00000364306 PPP4R3CPQ6ZMV5 832 aa12.2□□□□□ -0.46
RNU6-853P-201ENST00000364306 NCBP3Q53F19 620 aaKnown RBP12.02□□□□□ -0.49
RNU6-853P-201ENST00000364306 SCAF1Q9H7N4 1312 aaKnown RBP11.99□□□□□ -0.49
RNU6-853P-201ENST00000364306 CNKSR2Q8WXI2 1034 aa11.84□□□□□ -0.51
RNU6-853P-201ENST00000364306 NPM3O75607 178 aaKnown RBP11.78□□□□□ -0.52
RNU6-853P-201ENST00000364306 SLC4A1APQ9BWU0 796 aaKnown RBP11.7□□□□□ -0.54
RNU6-853P-201ENST00000364306 MAPK8IP2Q13387 824 aaPredicted RBP11.66□□□□□ -0.54
RNU6-853P-201ENST00000364306 EHMT2Q96KQ7 1210 aa11.61□□□□□ -0.55
RNU6-853P-201ENST00000364306 DMRT2Q9Y5R5 561 aa11.56□□□□□ -0.56
RNU6-853P-201ENST00000364306 RNF216Q9NWF9 866 aaPredicted RBP11.55□□□□□ -0.56
RNU6-853P-201ENST00000364306 DNAJC5BQ9UF47 199 aa11.55□□□□□ -0.56
RNU6-853P-201ENST00000364306 HOXD11P31277 338 aaPredicted RBP11.44□□□□□ -0.58
RNU6-853P-201ENST00000364306 CSRNP3Q8WYN3 585 aa11.39□□□□□ -0.59
RNU6-853P-201ENST00000364306 ZBTB22O15209 634 aa11.22□□□□□ -0.61
RNU6-853P-201ENST00000364306 FOXD4L1Q9NU39 408 aa11.2□□□□□ -0.62
RNU6-853P-201ENST00000364306 SLC4A2P04920 1241 aa11.05□□□□□ -0.64
RNU6-853P-201ENST00000364306 DCAF8L1A6NGE4 600 aa10.95□□□□□ -0.66
RNU6-853P-201ENST00000364306 MYCNP04198 464 aaPredicted RBP10.93□□□□□ -0.66
RNU6-853P-201ENST00000364306 ATXN8OSP0DMR3 200 aa10.85□□□□□ -0.67
RNU6-853P-201ENST00000364306 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.85□□□□□ -0.67
RNU6-853P-201ENST00000364306 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.76□□□□□ -0.69
RNU6-853P-201ENST00000364306 HNRNPUL2Q1KMD3 747 aaKnown RBP10.76□□□□□ -0.69
RNU6-853P-201ENST00000364306 SAMD1Q6SPF0 538 aaPredicted RBP10.71□□□□□ -0.69
RNU6-853P-201ENST00000364306 U3KPZ7 1027 aaPredicted RBP10.71□□□□□ -0.69
RNU6-853P-201ENST00000364306 APLP2Q06481 763 aa10.6□□□□□ -0.71
RNU6-853P-201ENST00000364306 POTEDQ86YR6 584 aa10.59□□□□□ -0.71
RNU6-853P-201ENST00000364306 ATF5Q9Y2D1 282 aaPredicted RBP10.52□□□□□ -0.73
RNU6-853P-201ENST00000364306 RNF39Q9H2S5 420 aa10.48□□□□□ -0.73
RNU6-853P-201ENST00000364306 C1QBPQ07021 282 aaKnown RBP10.4□□□□□ -0.74
RNU6-853P-201ENST00000364306 ZNF219Q9P2Y4 722 aaPredicted RBP10.39□□□□□ -0.75
RNU6-853P-201ENST00000364306 SPINK5Q9NQ38 1064 aaPredicted RBP10.29□□□□□ -0.76
RNU6-853P-201ENST00000364306 FKBP8Q14318 412 aa10.27□□□□□ -0.77
RNU6-853P-201ENST00000364306 CAPN15O75808 1086 aa10.25□□□□□ -0.77
RNU6-853P-201ENST00000364306 TRHP20396 242 aaPredicted RBP10.25□□□□□ -0.77
RNU6-853P-201ENST00000364306 POLA2Q14181 598 aa10.17□□□□□ -0.78
RNU6-853P-201ENST00000364306 FBLN2P98095 1184 aa10.16□□□□□ -0.78
RNU6-853P-201ENST00000364306 ZBTB12Q9Y330 459 aaPredicted RBP10.14□□□□□ -0.79
RNU6-853P-201ENST00000364306 MKRN4PQ13434 485 aaPredicted RBP10.11□□□□□ -0.79
RNU6-853P-201ENST00000364306 ABCB7O75027 752 aa10.05□□□□□ -0.8
RNU6-853P-201ENST00000364306 SPDYE4A6NLX3 237 aa10.04□□□□□ -0.8
RNU6-853P-201ENST00000364306 DSG3P32926 999 aa10.04□□□□□ -0.8
RNU6-853P-201ENST00000364306 CACNB1Q02641 598 aaPredicted RBP9.98□□□□□ -0.81
RNU6-853P-201ENST00000364306 PROM2Q8N271 834 aa9.97□□□□□ -0.81
RNU6-853P-201ENST00000364306 FBXO3Q9UK99 471 aa9.93□□□□□ -0.82
RNU6-853P-201ENST00000364306 AMER1Q5JTC6 1135 aaPredicted RBP9.91□□□□□ -0.82
RNU6-853P-201ENST00000364306 SPDYE2BA6NHP3 402 aa9.85□□□□□ -0.83
RNU6-853P-201ENST00000364306 SPDYE6P0CI01 402 aa9.85□□□□□ -0.83
RNU6-853P-201ENST00000364306 SPDYE2Q495Y8 402 aa9.85□□□□□ -0.83
RNU6-853P-201ENST00000364306 OSCARQ8IYS5 282 aa9.81□□□□□ -0.84
RNU6-853P-201ENST00000364306 RTN4Q9NQC3 1192 aaKnown RBP9.81□□□□□ -0.84
RNU6-853P-201ENST00000364306 ZNF692Q9BU19 519 aaPredicted RBP9.79□□□□□ -0.84
RNU6-853P-201ENST00000364306 SSUH2Q9Y2M2 353 aa9.79□□□□□ -0.84
RNU6-853P-201ENST00000364306 VASPP50552 380 aaPredicted RBP9.74□□□□□ -0.85
RNU6-853P-201ENST00000364306 PABPN1Q86U42 306 aaKnown RBP eCLIP9.67□□□□□ -0.86
RNU6-853P-201ENST00000364306 STAG3Q9UJ98 1225 aa9.67□□□□□ -0.86
RNU6-853P-201ENST00000364306 RBM42Q9BTD8 480 aaKnown RBP9.64□□□□□ -0.87
RNU6-853P-201ENST00000364306 IFNLR1Q8IU57 520 aaPredicted RBP9.58□□□□□ -0.88
RNU6-853P-201ENST00000364306 AKT1S1Q96B36 256 aa9.55□□□□□ -0.88
RNU6-853P-201ENST00000364306 PLCD3Q8N3E9 789 aa9.5□□□□□ -0.89
RNU6-853P-201ENST00000364306 SPDYE1Q8NFV5 336 aaPredicted RBP9.48□□□□□ -0.89
RNU6-853P-201ENST00000364306 PLEKHG5O94827 1062 aa9.47□□□□□ -0.89
RNU6-853P-201ENST00000364306 KLHL34Q8N239 644 aa9.47□□□□□ -0.89
RNU6-853P-201ENST00000364306 SPOCK2Q92563 424 aa9.47□□□□□ -0.89
RNU6-853P-201ENST00000364306 MIER1Q8N108 512 aa9.46□□□□□ -0.9
RNU6-853P-201ENST00000364306 ZBTB47Q9UFB7 747 aaPredicted RBP9.46□□□□□ -0.9
RNU6-853P-201ENST00000364306 REM2Q8IYK8 340 aaPredicted RBP9.41□□□□□ -0.9
RNU6-853P-201ENST00000364306 PKD2Q13563 968 aa9.38□□□□□ -0.91
RNU6-853P-201ENST00000364306 SLC24A1O60721 1099 aa9.35□□□□□ -0.91
RNU6-853P-201ENST00000364306 PRR29P0C7W0 189 aa9.34□□□□□ -0.91
RNU6-853P-201ENST00000364306 CLEC11AQ9Y240 323 aa9.34□□□□□ -0.91
RNU6-853P-201ENST00000364306 PITPNM1O00562 1244 aa9.3□□□□□ -0.92
RNU6-853P-201ENST00000364306 TRIM41Q8WV44 630 aa9.28□□□□□ -0.92
RNU6-853P-201ENST00000364306 ECM2O94769 699 aaPredicted RBP9.27□□□□□ -0.93
RNU6-853P-201ENST00000364306 CREBZFQ9NS37 354 aa9.27□□□□□ -0.93
RNU6-853P-201ENST00000364306 GSE1Q14687 1217 aa9.23□□□□□ -0.93
RNU6-853P-201ENST00000364306 DCAF8L2P0C7V8 631 aa9.22□□□□□ -0.93
RNU6-853P-201ENST00000364306 MNX1P50219 401 aaPredicted RBP9.22□□□□□ -0.93
RNU6-853P-201ENST00000364306 NUBP1P53384 320 aa9.22□□□□□ -0.93
RNU6-853P-201ENST00000364306 CIZ1Q9ULV3 898 aaPredicted RBP9.22□□□□□ -0.93
RNU6-853P-201ENST00000364306 NPM1P06748 294 aaKnown RBP eCLIP9.18□□□□□ -0.94
RNU6-853P-201ENST00000364306 FAM212AQ96EL1 285 aa9.18□□□□□ -0.94
RNU6-853P-201ENST00000364306 RGL2O15211 777 aa9.16□□□□□ -0.94
RNU6-853P-201ENST00000364306 PLCB2Q00722 1185 aa9.13□□□□□ -0.95
RNU6-853P-201ENST00000364306 DCAF8Q5TAQ9 597 aa9.12□□□□□ -0.95
RNU6-853P-201ENST00000364306 CHRM1P11229 460 aaPredicted RBP9.1□□□□□ -0.95
RNU6-853P-201ENST00000364306 RASEFQ8IZ41 740 aa9.1□□□□□ -0.95
RNU6-853P-201ENST00000364306 BBXQ8WY36 941 aaPredicted RBP9.1□□□□□ -0.95
RNU6-853P-201ENST00000364306 FXR2P51116 673 aaKnown RBP eCLIP9.09□□□□□ -0.95
RNU6-853P-201ENST00000364306 TAOK2Q9UL54 1235 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms