Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF43Q68DV7 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF43Q68DV7 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF43Q68DV7 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF43Q68DV7 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.8□□□□□ -1.64
RNF43Q68DV7 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
RNF43Q68DV7 AC009951.1-201ENST00000623674 2614 ntBASIC4.79□□□□□ -1.64
RNF43Q68DV7 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNF43Q68DV7 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
RNF43Q68DV7 Y_RNA.16-201ENST00000362421 102 ntBASIC4.79□□□□□ -1.64
RNF43Q68DV7 RNU1-76P-201ENST00000362903 159 ntBASIC4.79□□□□□ -1.64
RNF43Q68DV7 Y_RNA.81-201ENST00000362997 102 ntBASIC4.79□□□□□ -1.64
RNF43Q68DV7 Y_RNA.170-201ENST00000363746 110 ntBASIC4.79□□□□□ -1.64
RNF43Q68DV7 Y_RNA.199-201ENST00000364014 102 ntBASIC4.79□□□□□ -1.64
RNF43Q68DV7 RNU6-704P-201ENST00000364162 103 ntBASIC4.79□□□□□ -1.64
RNF43Q68DV7 MIR613-201ENST00000385248 95 ntBASIC4.79□□□□□ -1.64
RNF43Q68DV7 RNU11-4P-201ENST00000391149 133 ntBASIC4.79□□□□□ -1.64
RNF43Q68DV7 U3.29-201ENST00000391296 212 ntBASIC4.79□□□□□ -1.64
RNF43Q68DV7 MRPL35P1-201ENST00000404272 572 ntBASIC4.79□□□□□ -1.64
RNF43Q68DV7 AL080315.1-201ENST00000406055 466 ntBASIC4.79□□□□□ -1.64
RNF43Q68DV7 U3.42-201ENST00000408746 214 ntBASIC4.79□□□□□ -1.64
RNF43Q68DV7 RPS23P10-201ENST00000416185 486 ntBASIC4.79□□□□□ -1.64
RNF43Q68DV7 COX6CP10-201ENST00000416832 224 ntBASIC4.79□□□□□ -1.64
RNF43Q68DV7 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF43Q68DV7 CYP4F29P-201ENST00000420685 446 ntBASIC4.79□□□□□ -1.64
RNF43Q68DV7 Z74021.1-201ENST00000423610 407 ntBASIC4.79□□□□□ -1.64
RNF43Q68DV7 RPEP3-201ENST00000425462 676 ntBASIC4.79□□□□□ -1.64
RNF43Q68DV7 AC092423.1-201ENST00000430165 186 ntBASIC4.79□□□□□ -1.64
RNF43Q68DV7 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF43Q68DV7 AC008481.1-201ENST00000463278 396 ntBASIC4.79□□□□□ -1.64
RNF43Q68DV7 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF43Q68DV7 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF43Q68DV7 NDUFB4P9-201ENST00000511646 388 ntBASIC4.79□□□□□ -1.64
RNF43Q68DV7 ACA59.1-201ENST00000515966 143 ntBASIC4.79□□□□□ -1.64
RNF43Q68DV7 RNU6-346P-201ENST00000516288 111 ntBASIC4.79□□□□□ -1.64
RNF43Q68DV7 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
RNF43Q68DV7 AC126177.3-201ENST00000551839 688 ntBASIC4.79□□□□□ -1.64
RNF43Q68DV7 MTND6P33-201ENST00000571794 183 ntBASIC4.79□□□□□ -1.64
RNF43Q68DV7 MIR4643-201ENST00000577473 78 ntBASIC4.79□□□□□ -1.64
RNF43Q68DV7 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF43Q68DV7 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
RNF43Q68DV7 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RNF43Q68DV7 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNF43Q68DV7 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNF43Q68DV7 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNF43Q68DV7 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF43Q68DV7 BTBD10P1-201ENST00000549824 1352 ntBASIC4.78□□□□□ -1.64
RNF43Q68DV7 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF43Q68DV7 AL359893.1-201ENST00000447628 1580 ntBASIC4.78□□□□□ -1.64
RNF43Q68DV7 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
RNF43Q68DV7 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.78□□□□□ -1.64
RNF43Q68DV7 ZNF137P-201ENST00000456718 1920 ntBASIC4.78□□□□□ -1.64
RNF43Q68DV7 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.78□□□□□ -1.64
RNF43Q68DV7 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF43Q68DV7 RNA5SP509-201ENST00000364577 119 ntBASIC4.78□□□□□ -1.64
RNF43Q68DV7 SNORA69.1-201ENST00000390904 137 ntBASIC4.78□□□□□ -1.64
RNF43Q68DV7 SDHCP2-201ENST00000398565 501 ntBASIC4.78□□□□□ -1.64
RNF43Q68DV7 AL031736.2-201ENST00000426573 787 ntBASIC4.78□□□□□ -1.64
RNF43Q68DV7 AC006946.1-201ENST00000429106 328 ntBASIC4.78□□□□□ -1.64
RNF43Q68DV7 SETP5-201ENST00000437270 562 ntBASIC4.78□□□□□ -1.64
RNF43Q68DV7 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.78□□□□□ -1.64
RNF43Q68DV7 AL359073.1-201ENST00000448036 403 ntBASIC4.78□□□□□ -1.64
RNF43Q68DV7 SCARNA10-201ENST00000459255 330 ntBASIC4.78□□□□□ -1.64
RNF43Q68DV7 AC034236.1-201ENST00000469891 373 ntBASIC4.78□□□□□ -1.64
RNF43Q68DV7 AC010631.1-201ENST00000474150 156 ntBASIC4.78□□□□□ -1.64
RNF43Q68DV7 RNU6-27P-201ENST00000516146 107 ntBASIC4.78□□□□□ -1.64
RNF43Q68DV7 RNU6-1338P-201ENST00000516328 91 ntBASIC4.78□□□□□ -1.64
RNF43Q68DV7 RNU6-911P-201ENST00000516523 104 ntBASIC4.78□□□□□ -1.64
RNF43Q68DV7 snoU109.6-201ENST00000516831 118 ntBASIC4.78□□□□□ -1.64
RNF43Q68DV7 ERHP1-201ENST00000523006 310 ntBASIC4.78□□□□□ -1.64
RNF43Q68DV7 AC024405.2-202ENST00000532731 184 ntBASIC4.78□□□□□ -1.64
RNF43Q68DV7 AC106785.1-201ENST00000565935 262 ntBASIC4.78□□□□□ -1.64
RNF43Q68DV7 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RNF43Q68DV7 AC034229.5-201ENST00000624258 185 ntBASIC4.78□□□□□ -1.64
RNF43Q68DV7 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF43Q68DV7 OR14L1P-202ENST00000641545 3009 ntBASIC4.78□□□□□ -1.64
RNF43Q68DV7 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RNF43Q68DV7 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.78□□□□□ -1.64
RNF43Q68DV7 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF43Q68DV7 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF43Q68DV7 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF43Q68DV7 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.78□□□□□ -1.64
RNF43Q68DV7 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RNF43Q68DV7 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RNF43Q68DV7 AP000560.1-201ENST00000624150 1937 ntBASIC4.78□□□□□ -1.64
RNF43Q68DV7 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.77□□□□□ -1.65
RNF43Q68DV7 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF43Q68DV7 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF43Q68DV7 AP000756.2-201ENST00000624168 2567 ntBASIC4.77□□□□□ -1.65
RNF43Q68DV7 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF43Q68DV7 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
RNF43Q68DV7 AC005183.1-201ENST00000603687 1979 ntBASIC4.77□□□□□ -1.65
RNF43Q68DV7 AC021146.4-201ENST00000309229 279 ntBASIC4.77□□□□□ -1.65
RNF43Q68DV7 MIR411-201ENST00000362239 96 ntBASIC4.77□□□□□ -1.65
RNF43Q68DV7 Y_RNA.480-201ENST00000384364 102 ntBASIC4.77□□□□□ -1.65
RNF43Q68DV7 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.77□□□□□ -1.65
RNF43Q68DV7 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.77□□□□□ -1.65
RNF43Q68DV7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.77□□□□□ -1.65
RNF43Q68DV7 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.77□□□□□ -1.65
RNF43Q68DV7 AC239809.1-201ENST00000450470 217 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms