Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
GPC1P35052 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
GPC1P35052 FAM91A3P-201ENST00000456826 2544 ntBASIC4.99□□□□□ -1.61
GPC1P35052 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.99□□□□□ -1.61
GPC1P35052 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
GPC1P35052 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
GPC1P35052 AL672167.1-205ENST00000641112 3080 ntBASIC4.99□□□□□ -1.61
GPC1P35052 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
GPC1P35052 AC100821.1-201ENST00000523153 2479 ntBASIC4.99□□□□□ -1.61
GPC1P35052 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.99□□□□□ -1.61
GPC1P35052 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.98□□□□□ -1.61
GPC1P35052 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
GPC1P35052 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.98□□□□□ -1.61
GPC1P35052 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.98□□□□□ -1.61
GPC1P35052 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.98□□□□□ -1.61
GPC1P35052 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
GPC1P35052 RNA5SP335-201ENST00000363817 110 ntBASIC4.98□□□□□ -1.61
GPC1P35052 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
GPC1P35052 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
GPC1P35052 Y_RNA.400-201ENST00000383963 111 ntBASIC4.98□□□□□ -1.61
GPC1P35052 SNORA17A-201ENST00000391185 133 ntBASIC4.98□□□□□ -1.61
GPC1P35052 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.98□□□□□ -1.61
GPC1P35052 CTSL3P-202ENST00000412179 788 ntBASIC4.98□□□□□ -1.61
GPC1P35052 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.98□□□□□ -1.61
GPC1P35052 AC079780.1-201ENST00000428259 207 ntBASIC4.98□□□□□ -1.61
GPC1P35052 AC009237.7-201ENST00000447357 229 ntBASIC4.98□□□□□ -1.61
GPC1P35052 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.98□□□□□ -1.61
GPC1P35052 RPL23AP3-201ENST00000453844 468 ntBASIC4.98□□□□□ -1.61
GPC1P35052 SNORA31.19-201ENST00000517079 126 ntBASIC4.98□□□□□ -1.61
GPC1P35052 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4.98□□□□□ -1.61
GPC1P35052 AL121603.1-201ENST00000553815 142 ntBASIC4.98□□□□□ -1.61
GPC1P35052 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.98□□□□□ -1.61
GPC1P35052 AC131238.1-201ENST00000617135 328 ntBASIC4.98□□□□□ -1.61
GPC1P35052 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.98□□□□□ -1.61
GPC1P35052 SNORA17.5-201ENST00000630429 132 ntBASIC4.98□□□□□ -1.61
GPC1P35052 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
GPC1P35052 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
GPC1P35052 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
GPC1P35052 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
GPC1P35052 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
GPC1P35052 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
GPC1P35052 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.97□□□□□ -1.61
GPC1P35052 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.97□□□□□ -1.61
GPC1P35052 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
GPC1P35052 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
GPC1P35052 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
GPC1P35052 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
GPC1P35052 RNU6-1175P-201ENST00000365200 107 ntBASIC4.97□□□□□ -1.61
GPC1P35052 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
GPC1P35052 RNU6-20P-201ENST00000384106 107 ntBASIC4.97□□□□□ -1.61
GPC1P35052 MIR514A1-201ENST00000385133 98 ntBASIC4.97□□□□□ -1.61
GPC1P35052 Y_RNA.586-201ENST00000391146 98 ntBASIC4.97□□□□□ -1.61
GPC1P35052 OOSP1P1-201ENST00000423265 274 ntBASIC4.97□□□□□ -1.61
GPC1P35052 AP000907.1-201ENST00000428428 510 ntBASIC4.97□□□□□ -1.61
GPC1P35052 FABP5P15-201ENST00000453566 214 ntBASIC4.97□□□□□ -1.61
GPC1P35052 RPS5P7-201ENST00000456664 608 ntBASIC4.97□□□□□ -1.61
GPC1P35052 RN7SL547P-201ENST00000490793 290 ntBASIC4.97□□□□□ -1.61
GPC1P35052 RN7SL591P-201ENST00000496150 292 ntBASIC4.97□□□□□ -1.61
GPC1P35052 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.97□□□□□ -1.61
GPC1P35052 MIR4423-201ENST00000580922 80 ntBASIC4.97□□□□□ -1.61
GPC1P35052 RN7SL708P-201ENST00000580952 299 ntBASIC4.97□□□□□ -1.61
GPC1P35052 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.97□□□□□ -1.61
GPC1P35052 RMST_6.1-201ENST00000611980 203 ntBASIC4.97□□□□□ -1.61
GPC1P35052 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
GPC1P35052 MIR6839-201ENST00000620425 113 ntBASIC4.97□□□□□ -1.61
GPC1P35052 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.97□□□□□ -1.61
GPC1P35052 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.97□□□□□ -1.61
GPC1P35052 U4.7-201ENST00000638126 106 ntBASIC4.97□□□□□ -1.61
GPC1P35052 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
GPC1P35052 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
GPC1P35052 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
GPC1P35052 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
GPC1P35052 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
GPC1P35052 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
GPC1P35052 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
GPC1P35052 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
GPC1P35052 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
GPC1P35052 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
GPC1P35052 AC004817.4-201ENST00000602396 3625 ntBASIC4.96□□□□□ -1.61
GPC1P35052 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
GPC1P35052 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
GPC1P35052 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
GPC1P35052 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.96□□□□□ -1.62
GPC1P35052 AC090971.4-201ENST00000560291 1800 ntBASIC4.96□□□□□ -1.62
GPC1P35052 MIR323A-201ENST00000362199 86 ntBASIC4.96□□□□□ -1.62
GPC1P35052 Y_RNA.245-201ENST00000364493 95 ntBASIC4.96□□□□□ -1.62
GPC1P35052 Y_RNA.331-201ENST00000365267 102 ntBASIC4.96□□□□□ -1.62
GPC1P35052 SNORA51.8-201ENST00000384234 132 ntBASIC4.96□□□□□ -1.62
GPC1P35052 RNU6-541P-201ENST00000384709 110 ntBASIC4.96□□□□□ -1.62
GPC1P35052 Y_RNA.570-201ENST00000384750 101 ntBASIC4.96□□□□□ -1.62
GPC1P35052 MIR589-201ENST00000385238 99 ntBASIC4.96□□□□□ -1.62
GPC1P35052 RN7SKP206-201ENST00000410823 293 ntBASIC4.96□□□□□ -1.62
GPC1P35052 RN7SKP293-201ENST00000411389 296 ntBASIC4.96□□□□□ -1.62
GPC1P35052 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.96□□□□□ -1.62
GPC1P35052 CHEK2P5-201ENST00000423877 246 ntBASIC4.96□□□□□ -1.62
GPC1P35052 COX6B1P7-201ENST00000430845 235 ntBASIC4.96□□□□□ -1.62
GPC1P35052 RPL12P46-201ENST00000436610 195 ntBASIC4.96□□□□□ -1.62
GPC1P35052 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.96□□□□□ -1.62
GPC1P35052 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
GPC1P35052 RNU6-1114P-201ENST00000516022 107 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms