RNA–Protein interactions for RNA: ENST00000428428.1

AP000907.1-201, humanhuman

BASIC

Gene AP000907.1, Length 510 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000907.1-201ENST00000428428 AEBP2Q6ZN18 517 aaPredicted RBP14.24□□□□□ -0.13
AP000907.1-201ENST00000428428 CHIC1Q5VXU3 224 aa13.75□□□□□ -0.21
AP000907.1-201ENST00000428428 PHF23Q9BUL5 403 aaPredicted RBP12.15□□□□□ -0.46
AP000907.1-201ENST00000428428 SENP3Q9H4L4 574 aaPredicted RBP11.97□□□□□ -0.49
AP000907.1-201ENST00000428428 POTEDQ86YR6 584 aa11.61□□□□□ -0.55
AP000907.1-201ENST00000428428 FOXD1Q16676 465 aa11.21□□□□□ -0.61
AP000907.1-201ENST00000428428 PLPPR3Q6T4P5 718 aa11.09□□□□□ -0.63
AP000907.1-201ENST00000428428 PPP6R1Q9UPN7 881 aa10.78□□□□□ -0.68
AP000907.1-201ENST00000428428 ADRA2BP18089 450 aa10.76□□□□□ -0.69
AP000907.1-201ENST00000428428 PIAS4Q8N2W9 510 aaPredicted RBP10.55□□□□□ -0.72
AP000907.1-201ENST00000428428 MSH5O43196 834 aa10.4□□□□□ -0.74
AP000907.1-201ENST00000428428 PPP4R3CPQ6ZMV5 832 aa9.82□□□□□ -0.84
AP000907.1-201ENST00000428428 MAPK8IP2Q13387 824 aaPredicted RBP9.81□□□□□ -0.84
AP000907.1-201ENST00000428428 SCAF1Q9H7N4 1312 aaKnown RBP9.67□□□□□ -0.86
AP000907.1-201ENST00000428428 DMRT2Q9Y5R5 561 aa9.57□□□□□ -0.88
AP000907.1-201ENST00000428428 KCNA4P22459 653 aa9.56□□□□□ -0.88
AP000907.1-201ENST00000428428 NISCHQ9Y2I1 1504 aa9.51□□□□□ -0.89
AP000907.1-201ENST00000428428 CNKSR2Q8WXI2 1034 aa9.5□□□□□ -0.89
AP000907.1-201ENST00000428428 NCBP3Q53F19 620 aaKnown RBP9.45□□□□□ -0.9
AP000907.1-201ENST00000428428 NPM3O75607 178 aaKnown RBP9.42□□□□□ -0.9
AP000907.1-201ENST00000428428 CACNB1Q02641 598 aaPredicted RBP9.41□□□□□ -0.9
AP000907.1-201ENST00000428428 RNF216Q9NWF9 866 aaPredicted RBP9.33□□□□□ -0.92
AP000907.1-201ENST00000428428 HOXD11P31277 338 aaPredicted RBP9.32□□□□□ -0.92
AP000907.1-201ENST00000428428 DCAF8L1A6NGE4 600 aa9.25□□□□□ -0.93
AP000907.1-201ENST00000428428 SLC4A1APQ9BWU0 796 aaKnown RBP9.04□□□□□ -0.96
AP000907.1-201ENST00000428428 DNAJC5BQ9UF47 199 aa8.98□□□□□ -0.97
AP000907.1-201ENST00000428428 SLC4A2P04920 1241 aa8.93□□□□□ -0.98
AP000907.1-201ENST00000428428 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.93□□□□□ -0.98
AP000907.1-201ENST00000428428 POTEHQ6S545 545 aa8.92□□□□□ -0.98
AP000907.1-201ENST00000428428 ABCC9O60706 1549 aa8.85□□□□□ -0.99
AP000907.1-201ENST00000428428 ZBTB22O15209 634 aa8.83□□□□□ -1
AP000907.1-201ENST00000428428 RNF39Q9H2S5 420 aa8.83□□□□□ -1
AP000907.1-201ENST00000428428 U3KPZ7 1027 aaPredicted RBP8.8□□□□□ -1
AP000907.1-201ENST00000428428 EHMT2Q96KQ7 1210 aa8.79□□□□□ -1
AP000907.1-201ENST00000428428 FOXD4L1Q9NU39 408 aa8.75□□□□□ -1.01
AP000907.1-201ENST00000428428 CCDC180Q9P1Z9 1646 aa8.71□□□□□ -1.02
AP000907.1-201ENST00000428428 C1QBPQ07021 282 aaKnown RBP8.67□□□□□ -1.02
AP000907.1-201ENST00000428428 CSRNP3Q8WYN3 585 aa8.67□□□□□ -1.02
AP000907.1-201ENST00000428428 MYCNP04198 464 aaPredicted RBP8.64□□□□□ -1.03
AP000907.1-201ENST00000428428 SPINK5Q9NQ38 1064 aaPredicted RBP8.62□□□□□ -1.03
AP000907.1-201ENST00000428428 CAPN15O75808 1086 aa8.55□□□□□ -1.04
AP000907.1-201ENST00000428428 ATF5Q9Y2D1 282 aaPredicted RBP8.54□□□□□ -1.04
AP000907.1-201ENST00000428428 SAMD1Q6SPF0 538 aaPredicted RBP8.53□□□□□ -1.04
AP000907.1-201ENST00000428428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.52□□□□□ -1.05
AP000907.1-201ENST00000428428 HNRNPUL2Q1KMD3 747 aaKnown RBP8.52□□□□□ -1.05
AP000907.1-201ENST00000428428 TRHP20396 242 aaPredicted RBP8.51□□□□□ -1.05
AP000907.1-201ENST00000428428 ABCB7O75027 752 aa8.44□□□□□ -1.06
AP000907.1-201ENST00000428428 APLP2Q06481 763 aa8.42□□□□□ -1.06
AP000907.1-201ENST00000428428 DSG3P32926 999 aa8.4□□□□□ -1.06
AP000907.1-201ENST00000428428 ZNF219Q9P2Y4 722 aaPredicted RBP8.4□□□□□ -1.06
AP000907.1-201ENST00000428428 ATXN8OSP0DMR3 200 aa8.36□□□□□ -1.07
AP000907.1-201ENST00000428428 RB1CC1Q8TDY2 1594 aa8.35□□□□□ -1.07
AP000907.1-201ENST00000428428 POLA2Q14181 598 aa8.33□□□□□ -1.08
AP000907.1-201ENST00000428428 NACADO15069 1562 aa8.27□□□□□ -1.09
AP000907.1-201ENST00000428428 UNC13AQ9UPW8 1703 aa8.25□□□□□ -1.09
AP000907.1-201ENST00000428428 BICRAQ9NZM4 1560 aa8.22□□□□□ -1.09
AP000907.1-201ENST00000428428 MKRN4PQ13434 485 aaPredicted RBP8.14□□□□□ -1.11
AP000907.1-201ENST00000428428 MYO15BQ96JP2 1530 aa8.13□□□□□ -1.11
AP000907.1-201ENST00000428428 PABPN1Q86U42 306 aaKnown RBP eCLIP8.13□□□□□ -1.11
AP000907.1-201ENST00000428428 SHROOM4Q9ULL8 1493 aa8.08□□□□□ -1.12
AP000907.1-201ENST00000428428 OSCARQ8IYS5 282 aa8.08□□□□□ -1.12
AP000907.1-201ENST00000428428 DNAJC5Q9H3Z4 198 aa8.08□□□□□ -1.12
AP000907.1-201ENST00000428428 ZBTB12Q9Y330 459 aaPredicted RBP8.06□□□□□ -1.12
AP000907.1-201ENST00000428428 CC2D2AQ9P2K1 1620 aa8.05□□□□□ -1.12
AP000907.1-201ENST00000428428 FBLN2P98095 1184 aa8.05□□□□□ -1.12
AP000907.1-201ENST00000428428 CECR2Q9BXF3 1484 aa8.03□□□□□ -1.12
AP000907.1-201ENST00000428428 EIF4G1Q04637 1599 aaKnown RBP7.98□□□□□ -1.13
AP000907.1-201ENST00000428428 SP7Q8TDD2 431 aaPredicted RBP7.96□□□□□ -1.14
AP000907.1-201ENST00000428428 RBM42Q9BTD8 480 aaKnown RBP7.92□□□□□ -1.14
AP000907.1-201ENST00000428428 DCAF1Q9Y4B6 1507 aa7.91□□□□□ -1.14
AP000907.1-201ENST00000428428 ZNF692Q9BU19 519 aaPredicted RBP7.89□□□□□ -1.15
AP000907.1-201ENST00000428428 SPDYE2BA6NHP3 402 aa7.88□□□□□ -1.15
AP000907.1-201ENST00000428428 SPDYE6P0CI01 402 aa7.88□□□□□ -1.15
AP000907.1-201ENST00000428428 SPDYE2Q495Y8 402 aa7.88□□□□□ -1.15
AP000907.1-201ENST00000428428 SPDYE4A6NLX3 237 aa7.87□□□□□ -1.15
AP000907.1-201ENST00000428428 ZCCHC6Q5VYS8 1495 aaKnown RBP7.86□□□□□ -1.15
AP000907.1-201ENST00000428428 DCAF8L2P0C7V8 631 aa7.85□□□□□ -1.15
AP000907.1-201ENST00000428428 FKBP8Q14318 412 aa7.85□□□□□ -1.15
AP000907.1-201ENST00000428428 SSUH2Q9Y2M2 353 aa7.85□□□□□ -1.15
AP000907.1-201ENST00000428428 AKT1S1Q96B36 256 aa7.83□□□□□ -1.16
AP000907.1-201ENST00000428428 REM2Q8IYK8 340 aaPredicted RBP7.82□□□□□ -1.16
AP000907.1-201ENST00000428428 SCRIBQ14160 1630 aa7.81□□□□□ -1.16
AP000907.1-201ENST00000428428 CUX2O14529 1486 aa7.81□□□□□ -1.16
AP000907.1-201ENST00000428428 CHRDL2Q6WN34 429 aa7.76□□□□□ -1.17
AP000907.1-201ENST00000428428 PITPNM1O00562 1244 aa7.75□□□□□ -1.17
AP000907.1-201ENST00000428428 CLEC11AQ9Y240 323 aa7.74□□□□□ -1.17
AP000907.1-201ENST00000428428 PROM2Q8N271 834 aa7.68□□□□□ -1.18
AP000907.1-201ENST00000428428 SPDYE1Q8NFV5 336 aaPredicted RBP7.67□□□□□ -1.18
AP000907.1-201ENST00000428428 NCAPD3P42695 1498 aa7.64□□□□□ -1.19
AP000907.1-201ENST00000428428 PLSCR2Q9NRY7 297 aa7.64□□□□□ -1.19
AP000907.1-201ENST00000428428 THOC2Q8NI27 1593 aaKnown RBP7.63□□□□□ -1.19
AP000907.1-201ENST00000428428 ERCC6Q03468 1493 aa7.62□□□□□ -1.19
AP000907.1-201ENST00000428428 PIP4P2Q8N4L2 257 aa7.61□□□□□ -1.19
AP000907.1-201ENST00000428428 PRR29P0C7W0 189 aa7.6□□□□□ -1.19
AP000907.1-201ENST00000428428 CHADLQ6NUI6 762 aa7.59□□□□□ -1.19
AP000907.1-201ENST00000428428 HMGXB3Q12766 1538 aa7.58□□□□□ -1.2
AP000907.1-201ENST00000428428 NESP48681 1621 aa7.56□□□□□ -1.2
AP000907.1-201ENST00000428428 FXR2P51116 673 aaKnown RBP eCLIP7.56□□□□□ -1.2
AP000907.1-201ENST00000428428 ATAD2BQ9ULI0 1458 aa7.55□□□□□ -1.2
AP000907.1-201ENST00000428428 PRKAR2AP13861 404 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms