Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 DDX10P1-201ENST00000448545 1933 ntBASIC5.82□□□□□ -1.48
RC3H1Q5TC82 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
RC3H1Q5TC82 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
RC3H1Q5TC82 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RC3H1Q5TC82 MTND5P9-201ENST00000503854 1755 ntBASIC5.81□□□□□ -1.48
RC3H1Q5TC82 A2MP1-204ENST00000566278 4130 ntBASIC5.81□□□□□ -1.48
RC3H1Q5TC82 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
RC3H1Q5TC82 RNU6-215P-201ENST00000365169 102 ntBASIC5.81□□□□□ -1.48
RC3H1Q5TC82 MTCYBP2-201ENST00000407745 171 ntBASIC5.81□□□□□ -1.48
RC3H1Q5TC82 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.81□□□□□ -1.48
RC3H1Q5TC82 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.81□□□□□ -1.48
RC3H1Q5TC82 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.81□□□□□ -1.48
RC3H1Q5TC82 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.81□□□□□ -1.48
RC3H1Q5TC82 AC092573.2-201ENST00000434546 243 ntBASIC5.81□□□□□ -1.48
RC3H1Q5TC82 SNORA84-201ENST00000459229 133 ntBASIC5.81□□□□□ -1.48
RC3H1Q5TC82 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.81□□□□□ -1.48
RC3H1Q5TC82 MTND3P25-201ENST00000509243 135 ntBASIC5.81□□□□□ -1.48
RC3H1Q5TC82 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.81□□□□□ -1.48
RC3H1Q5TC82 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.81□□□□□ -1.48
RC3H1Q5TC82 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.81□□□□□ -1.48
RC3H1Q5TC82 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
RC3H1Q5TC82 AL162424.1-201ENST00000602325 221 ntBASIC5.81□□□□□ -1.48
RC3H1Q5TC82 AC006077.1-201ENST00000604746 343 ntBASIC5.81□□□□□ -1.48
RC3H1Q5TC82 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.81□□□□□ -1.48
RC3H1Q5TC82 AC097372.5-201ENST00000623665 376 ntBASIC5.81□□□□□ -1.48
RC3H1Q5TC82 AC091895.1-201ENST00000624494 256 ntBASIC5.81□□□□□ -1.48
RC3H1Q5TC82 MFSD8-242ENST00000641690 4199 ntBASIC5.81□□□□□ -1.48
RC3H1Q5TC82 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.81□□□□□ -1.48
RC3H1Q5TC82 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
RC3H1Q5TC82 AC107027.3-201ENST00000565095 3473 ntBASIC5.8□□□□□ -1.48
RC3H1Q5TC82 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RC3H1Q5TC82 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
RC3H1Q5TC82 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RC3H1Q5TC82 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RC3H1Q5TC82 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RC3H1Q5TC82 RN7SKP224-201ENST00000364140 325 ntBASIC5.8□□□□□ -1.48
RC3H1Q5TC82 RNU1-132P-201ENST00000364300 164 ntBASIC5.8□□□□□ -1.48
RC3H1Q5TC82 Y_RNA.343-201ENST00000365354 112 ntBASIC5.8□□□□□ -1.48
RC3H1Q5TC82 RNU6-178P-201ENST00000384631 104 ntBASIC5.8□□□□□ -1.48
RC3H1Q5TC82 RPL21P75-201ENST00000396599 483 ntBASIC5.8□□□□□ -1.48
RC3H1Q5TC82 RPL21P28-201ENST00000401418 483 ntBASIC5.8□□□□□ -1.48
RC3H1Q5TC82 AL079342.1-201ENST00000401460 267 ntBASIC5.8□□□□□ -1.48
RC3H1Q5TC82 AL022722.2-201ENST00000402519 180 ntBASIC5.8□□□□□ -1.48
RC3H1Q5TC82 RPL21P67-201ENST00000402896 478 ntBASIC5.8□□□□□ -1.48
RC3H1Q5TC82 AL590556.1-201ENST00000423231 483 ntBASIC5.8□□□□□ -1.48
RC3H1Q5TC82 AL031736.2-201ENST00000426573 787 ntBASIC5.8□□□□□ -1.48
RC3H1Q5TC82 CYCSP43-201ENST00000438233 310 ntBASIC5.8□□□□□ -1.48
RC3H1Q5TC82 RPL21P11-201ENST00000461458 483 ntBASIC5.8□□□□□ -1.48
RC3H1Q5TC82 RPL21P39-201ENST00000463605 483 ntBASIC5.8□□□□□ -1.48
RC3H1Q5TC82 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.8□□□□□ -1.48
RC3H1Q5TC82 VN1R105P-201ENST00000486595 910 ntBASIC5.8□□□□□ -1.48
RC3H1Q5TC82 AC132942.1-201ENST00000486753 483 ntBASIC5.8□□□□□ -1.48
RC3H1Q5TC82 AC093591.1-201ENST00000491435 481 ntBASIC5.8□□□□□ -1.48
RC3H1Q5TC82 RPL21P16-201ENST00000495531 483 ntBASIC5.8□□□□□ -1.48
RC3H1Q5TC82 AC016065.2-201ENST00000514530 444 ntBASIC5.8□□□□□ -1.48
RC3H1Q5TC82 AC074133.1-201ENST00000515696 183 ntBASIC5.8□□□□□ -1.48
RC3H1Q5TC82 AC005868.1-201ENST00000536421 331 ntBASIC5.8□□□□□ -1.48
RC3H1Q5TC82 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.8□□□□□ -1.48
RC3H1Q5TC82 AC006349.1-201ENST00000555526 235 ntBASIC5.8□□□□□ -1.48
RC3H1Q5TC82 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.8□□□□□ -1.48
RC3H1Q5TC82 AC006130.2-201ENST00000586202 326 ntBASIC5.8□□□□□ -1.48
RC3H1Q5TC82 AC006329.2-201ENST00000611491 394 ntBASIC5.8□□□□□ -1.48
RC3H1Q5TC82 AC004817.4-201ENST00000602396 3625 ntBASIC5.8□□□□□ -1.48
RC3H1Q5TC82 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
RC3H1Q5TC82 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
RC3H1Q5TC82 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
RC3H1Q5TC82 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RC3H1Q5TC82 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RC3H1Q5TC82 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.8□□□□□ -1.48
RC3H1Q5TC82 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RC3H1Q5TC82 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RC3H1Q5TC82 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.79□□□□□ -1.48
RC3H1Q5TC82 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RC3H1Q5TC82 AC004656.1-201ENST00000568479 4951 ntBASIC5.79□□□□□ -1.48
RC3H1Q5TC82 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
RC3H1Q5TC82 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
RC3H1Q5TC82 RNU4-90P-201ENST00000362773 141 ntBASIC5.79□□□□□ -1.48
RC3H1Q5TC82 RNU6-937P-201ENST00000384325 106 ntBASIC5.79□□□□□ -1.48
RC3H1Q5TC82 RNY3P4-201ENST00000384428 101 ntBASIC5.79□□□□□ -1.48
RC3H1Q5TC82 RNU6-14P-201ENST00000384630 106 ntBASIC5.79□□□□□ -1.48
RC3H1Q5TC82 PPIAP31-201ENST00000405422 495 ntBASIC5.79□□□□□ -1.48
RC3H1Q5TC82 U3.35-201ENST00000408405 208 ntBASIC5.79□□□□□ -1.48
RC3H1Q5TC82 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.79□□□□□ -1.48
RC3H1Q5TC82 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC5.79□□□□□ -1.48
RC3H1Q5TC82 AL354710.1-201ENST00000453641 246 ntBASIC5.79□□□□□ -1.48
RC3H1Q5TC82 RN7SL604P-201ENST00000492589 296 ntBASIC5.79□□□□□ -1.48
RC3H1Q5TC82 PARP4P3-201ENST00000510265 317 ntBASIC5.79□□□□□ -1.48
RC3H1Q5TC82 RNU6-513P-201ENST00000516104 104 ntBASIC5.79□□□□□ -1.48
RC3H1Q5TC82 MIR92B-201ENST00000607575 96 ntBASIC5.79□□□□□ -1.48
RC3H1Q5TC82 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RC3H1Q5TC82 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.79□□□□□ -1.48
RC3H1Q5TC82 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RC3H1Q5TC82 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.79□□□□□ -1.48
RC3H1Q5TC82 AC007529.1-201ENST00000418574 2178 ntBASIC5.79□□□□□ -1.48
RC3H1Q5TC82 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.78□□□□□ -1.48
RC3H1Q5TC82 RBBP8P1-201ENST00000449447 1844 ntBASIC5.78□□□□□ -1.48
RC3H1Q5TC82 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
RC3H1Q5TC82 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.78□□□□□ -1.48
RC3H1Q5TC82 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
RC3H1Q5TC82 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms