Protein–RNA interactions for Protein: Q9BYQ6

KRTAP4-11, Keratin-associated protein 4-11, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-11Q9BYQ6 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 DIO2-202ENST00000438257 6136 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 SERPINA1-201ENST00000355814 3236 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 TTC39C-203ENST00000540918 4117 ntTSL 2 BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 MBTD1-203ENST00000415868 5099 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 PTGS2-201ENST00000367468 4514 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 METTL15-204ENST00000407364 4242 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 AC107068.1-201ENST00000563286 4218 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 NTRK3-221ENST00000629765 2714 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 MAPK10-349ENST00000641767 3661 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 TGM4-201ENST00000296125 3388 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 SEC16A-204ENST00000313084 3073 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 GRIA1-213ENST00000521843 3069 ntTSL 2 BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 AC131392.2-201ENST00000505635 4332 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 CEP152-202ENST00000380950 5635 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 HERC2P3-206ENST00000429257 4088 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 MUC20-204ENST00000445522 2842 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 RNA5SP389-201ENST00000362610 115 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 RNA5SP226-201ENST00000362653 115 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 Y_RNA.345-201ENST00000365384 92 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 MIR146B-201ENST00000365699 73 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 RNU6-1031P-201ENST00000384773 107 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 U3.27-201ENST00000391237 200 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 MIR937-201ENST00000401271 86 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 AL359511.1-201ENST00000402970 211 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 RNU4-34P-201ENST00000410431 124 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 EZR-AS1-201ENST00000451712 217 ntTSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 MRPS21P1-201ENST00000453850 223 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 RNU7-74P-201ENST00000459104 62 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 RN7SL518P-201ENST00000491887 280 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 SCARNA16.3-201ENST00000516595 184 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 RN7SKP234-201ENST00000517173 224 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 MT1CP-201ENST00000567054 174 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 RN7SL154P-201ENST00000578043 324 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 MIR5003-201ENST00000581891 99 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 MIR5682-201ENST00000584864 76 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 AC087575.1-201ENST00000585087 229 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 AC007136.1-201ENST00000589141 199 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 AC020908.2-201ENST00000595134 405 ntTSL 2 BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 AL358335.3-201ENST00000604678 327 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 AC092960.1-201ENST00000604762 351 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 RN7SL261P-201ENST00000613441 282 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 uc_338.29-201ENST00000615099 168 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 uc_338.37-201ENST00000620113 186 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 MIR6739-201ENST00000622461 75 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 AC027279.3-201ENST00000625055 122 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 AC016251.1-201ENST00000624299 4198 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 CAPN3-206ENST00000397163 3228 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 TENM2-205ENST00000519204 9427 ntTSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 ZNF169-201ENST00000340911 2336 ntTSL 2 BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 LINC00607-205ENST00000445174 3690 ntTSL 2 BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 NBPF19-203ENST00000578189 5034 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 BACH2-201ENST00000257749 9113 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 LPP-208ENST00000448637 5835 ntTSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 RETSAT-201ENST00000295802 3100 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 AC123769.2-201ENST00000624332 5984 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 NEDD4L-203ENST00000357895 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 ZEB2-201ENST00000303660 3913 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 BUB1-212ENST00000535254 3576 ntTSL 2 BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 PPFIBP1-207ENST00000537927 5719 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 AZIN1-202ENST00000347770 2857 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 RASSF6-203ENST00000342081 4331 ntAPPRIS P4 TSL 2 BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 CTNNA2-209ENST00000466387 4349 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 SBNO1-203ENST00000602398 4313 ntAPPRIS ALT1 TSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 AL355834.1-201ENST00000556602 3965 ntBASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 PCSK1-201ENST00000311106 5086 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 BUB1B-202ENST00000412359 3628 ntTSL 2 BASIC2.08□□□□□ -2.08
KRTAP4-11Q9BYQ6 AMER1-201ENST00000330258 8443 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms