Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCA3PQ9Y6N3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCA3PQ9Y6N3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLCA3PQ9Y6N3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCA3PQ9Y6N3 FSCN1P1-201ENST00000568912 1481 ntBASIC18.03■□□□□ 0.48
CLCA3PQ9Y6N3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLCA3PQ9Y6N3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLCA3PQ9Y6N3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.03■□□□□ 0.48
CLCA3PQ9Y6N3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.03■□□□□ 0.48
CLCA3PQ9Y6N3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
CLCA3PQ9Y6N3 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.03■□□□□ 0.48
CLCA3PQ9Y6N3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCA3PQ9Y6N3 HCG11-201ENST00000411553 5696 ntBASIC18.03■□□□□ 0.48
CLCA3PQ9Y6N3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCA3PQ9Y6N3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCA3PQ9Y6N3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.03■□□□□ 0.48
CLCA3PQ9Y6N3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
CLCA3PQ9Y6N3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCA3PQ9Y6N3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCA3PQ9Y6N3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CLCA3PQ9Y6N3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCA3PQ9Y6N3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCA3PQ9Y6N3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCA3PQ9Y6N3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCA3PQ9Y6N3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.02■□□□□ 0.48
CLCA3PQ9Y6N3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCA3PQ9Y6N3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
CLCA3PQ9Y6N3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.02■□□□□ 0.48
CLCA3PQ9Y6N3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.02■□□□□ 0.48
CLCA3PQ9Y6N3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.02■□□□□ 0.48
CLCA3PQ9Y6N3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.02■□□□□ 0.48
CLCA3PQ9Y6N3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
CLCA3PQ9Y6N3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CLCA3PQ9Y6N3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLCA3PQ9Y6N3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
CLCA3PQ9Y6N3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLCA3PQ9Y6N3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLCA3PQ9Y6N3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLCA3PQ9Y6N3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLCA3PQ9Y6N3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCA3PQ9Y6N3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCA3PQ9Y6N3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.01■□□□□ 0.47
CLCA3PQ9Y6N3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CLCA3PQ9Y6N3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCA3PQ9Y6N3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CLCA3PQ9Y6N3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.01■□□□□ 0.47
CLCA3PQ9Y6N3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCA3PQ9Y6N3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCA3PQ9Y6N3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCA3PQ9Y6N3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCA3PQ9Y6N3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.01■□□□□ 0.47
CLCA3PQ9Y6N3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCA3PQ9Y6N3 AC116562.2-201ENST00000507042 360 ntBASIC18.01■□□□□ 0.47
CLCA3PQ9Y6N3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.01■□□□□ 0.47
CLCA3PQ9Y6N3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.01■□□□□ 0.47
CLCA3PQ9Y6N3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.01■□□□□ 0.47
CLCA3PQ9Y6N3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.01■□□□□ 0.47
CLCA3PQ9Y6N3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCA3PQ9Y6N3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CLCA3PQ9Y6N3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCA3PQ9Y6N3 REXO1L10P-201ENST00000615707 1290 ntBASIC18.01■□□□□ 0.47
CLCA3PQ9Y6N3 MIR6786-201ENST00000616843 113 ntBASIC18.01■□□□□ 0.47
CLCA3PQ9Y6N3 REXO1L12P-201ENST00000622156 912 ntBASIC18.01■□□□□ 0.47
CLCA3PQ9Y6N3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.01■□□□□ 0.47
CLCA3PQ9Y6N3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.01■□□□□ 0.47
CLCA3PQ9Y6N3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCA3PQ9Y6N3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCA3PQ9Y6N3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCA3PQ9Y6N3 AC104417.2-201ENST00000562989 1793 ntBASIC18.01■□□□□ 0.47
CLCA3PQ9Y6N3 AC004408.2-201ENST00000623613 2777 ntBASIC18.01■□□□□ 0.47
CLCA3PQ9Y6N3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCA3PQ9Y6N3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCA3PQ9Y6N3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCA3PQ9Y6N3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
CLCA3PQ9Y6N3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CLCA3PQ9Y6N3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CLCA3PQ9Y6N3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLCA3PQ9Y6N3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
CLCA3PQ9Y6N3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CLCA3PQ9Y6N3 AC004951.3-201ENST00000418645 1148 ntBASIC18■□□□□ 0.47
CLCA3PQ9Y6N3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CLCA3PQ9Y6N3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18■□□□□ 0.47
CLCA3PQ9Y6N3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CLCA3PQ9Y6N3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18■□□□□ 0.47
CLCA3PQ9Y6N3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18■□□□□ 0.47
CLCA3PQ9Y6N3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCA3PQ9Y6N3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCA3PQ9Y6N3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCA3PQ9Y6N3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCA3PQ9Y6N3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CLCA3PQ9Y6N3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCA3PQ9Y6N3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CLCA3PQ9Y6N3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CLCA3PQ9Y6N3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CLCA3PQ9Y6N3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLCA3PQ9Y6N3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CLCA3PQ9Y6N3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLCA3PQ9Y6N3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLCA3PQ9Y6N3 RCC2P6-201ENST00000526625 1557 ntBASIC18■□□□□ 0.47
CLCA3PQ9Y6N3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms