Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
ARFGEF1Q9Y6D6 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
ARFGEF1Q9Y6D6 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC23.31■■□□□ 1.32
ARFGEF1Q9Y6D6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC23.31■■□□□ 1.32
ARFGEF1Q9Y6D6 ABR-217ENST00000572441 563 ntTSL 4 BASIC23.31■■□□□ 1.32
ARFGEF1Q9Y6D6 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ARFGEF1Q9Y6D6 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ARFGEF1Q9Y6D6 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.31■■□□□ 1.32
ARFGEF1Q9Y6D6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
ARFGEF1Q9Y6D6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
ARFGEF1Q9Y6D6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.31■■□□□ 1.32
ARFGEF1Q9Y6D6 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ARFGEF1Q9Y6D6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC23.31■■□□□ 1.32
ARFGEF1Q9Y6D6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ARFGEF1Q9Y6D6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
ARFGEF1Q9Y6D6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ARFGEF1Q9Y6D6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC23.31■■□□□ 1.32
ARFGEF1Q9Y6D6 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ARFGEF1Q9Y6D6 FAM220CP-201ENST00000395253 831 ntBASIC23.31■■□□□ 1.32
ARFGEF1Q9Y6D6 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC23.31■■□□□ 1.32
ARFGEF1Q9Y6D6 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC23.31■■□□□ 1.32
ARFGEF1Q9Y6D6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ARFGEF1Q9Y6D6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
ARFGEF1Q9Y6D6 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
ARFGEF1Q9Y6D6 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.3■■□□□ 1.32
ARFGEF1Q9Y6D6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC23.3■■□□□ 1.32
ARFGEF1Q9Y6D6 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC23.3■■□□□ 1.32
ARFGEF1Q9Y6D6 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ARFGEF1Q9Y6D6 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ARFGEF1Q9Y6D6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ARFGEF1Q9Y6D6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
ARFGEF1Q9Y6D6 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
ARFGEF1Q9Y6D6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC23.3■■□□□ 1.32
ARFGEF1Q9Y6D6 GPR32P1-201ENST00000601788 811 ntBASIC23.3■■□□□ 1.32
ARFGEF1Q9Y6D6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC23.3■■□□□ 1.32
ARFGEF1Q9Y6D6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC23.3■■□□□ 1.32
ARFGEF1Q9Y6D6 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ARFGEF1Q9Y6D6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ARFGEF1Q9Y6D6 SMG8-203ENST00000578922 2178 ntBASIC23.29■■□□□ 1.32
ARFGEF1Q9Y6D6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.29■■□□□ 1.32
ARFGEF1Q9Y6D6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
ARFGEF1Q9Y6D6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
ARFGEF1Q9Y6D6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ARFGEF1Q9Y6D6 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ARFGEF1Q9Y6D6 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
ARFGEF1Q9Y6D6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC23.29■■□□□ 1.32
ARFGEF1Q9Y6D6 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
ARFGEF1Q9Y6D6 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
ARFGEF1Q9Y6D6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
ARFGEF1Q9Y6D6 COX10-202ENST00000429152 875 ntTSL 2 BASIC23.29■■□□□ 1.32
ARFGEF1Q9Y6D6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC23.29■■□□□ 1.32
ARFGEF1Q9Y6D6 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC23.29■■□□□ 1.32
ARFGEF1Q9Y6D6 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
ARFGEF1Q9Y6D6 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC23.29■■□□□ 1.32
ARFGEF1Q9Y6D6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ARFGEF1Q9Y6D6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC23.29■■□□□ 1.32
ARFGEF1Q9Y6D6 AC243591.1-201ENST00000452967 1364 ntBASIC23.29■■□□□ 1.32
ARFGEF1Q9Y6D6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ARFGEF1Q9Y6D6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ARFGEF1Q9Y6D6 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
ARFGEF1Q9Y6D6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC23.29■■□□□ 1.32
ARFGEF1Q9Y6D6 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ARFGEF1Q9Y6D6 CDV3-207ENST00000508481 661 ntTSL 3 BASIC23.29■■□□□ 1.32
ARFGEF1Q9Y6D6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC23.29■■□□□ 1.32
ARFGEF1Q9Y6D6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC23.29■■□□□ 1.32
ARFGEF1Q9Y6D6 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC23.29■■□□□ 1.32
ARFGEF1Q9Y6D6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
ARFGEF1Q9Y6D6 Z69720.1-201ENST00000601483 472 ntBASIC23.29■■□□□ 1.32
ARFGEF1Q9Y6D6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC23.29■■□□□ 1.32
ARFGEF1Q9Y6D6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.28■■□□□ 1.32
ARFGEF1Q9Y6D6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
ARFGEF1Q9Y6D6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ARFGEF1Q9Y6D6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC23.28■■□□□ 1.32
ARFGEF1Q9Y6D6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ARFGEF1Q9Y6D6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.28■■□□□ 1.32
ARFGEF1Q9Y6D6 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ARFGEF1Q9Y6D6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ARFGEF1Q9Y6D6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC23.28■■□□□ 1.32
ARFGEF1Q9Y6D6 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC23.28■■□□□ 1.32
ARFGEF1Q9Y6D6 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ARFGEF1Q9Y6D6 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ARFGEF1Q9Y6D6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ARFGEF1Q9Y6D6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
ARFGEF1Q9Y6D6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
ARFGEF1Q9Y6D6 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC23.27■■□□□ 1.32
ARFGEF1Q9Y6D6 IGHV3-47-201ENST00000425060 335 ntBASIC23.27■■□□□ 1.32
ARFGEF1Q9Y6D6 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC23.27■■□□□ 1.32
ARFGEF1Q9Y6D6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC23.27■■□□□ 1.32
ARFGEF1Q9Y6D6 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC23.27■■□□□ 1.32
ARFGEF1Q9Y6D6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ARFGEF1Q9Y6D6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ARFGEF1Q9Y6D6 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ARFGEF1Q9Y6D6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC23.27■■□□□ 1.32
ARFGEF1Q9Y6D6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC23.27■■□□□ 1.32
ARFGEF1Q9Y6D6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
ARFGEF1Q9Y6D6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ARFGEF1Q9Y6D6 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ARFGEF1Q9Y6D6 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ARFGEF1Q9Y6D6 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC23.26■■□□□ 1.31
ARFGEF1Q9Y6D6 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms